(Q27621598)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

title

Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

0 references

0 references

1 reference

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4 November 2019

M Worbs

1 reference

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4 November 2019

R Huber

series ordinal

1 reference

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4 November 2019

language of work or name

English

0 references

publication date

1 March 2000

1 reference

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4 November 2019

1 reference

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4 November 2019

volume

1 reference

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4 November 2019

issue

1 reference

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4 November 2019

page(s)

807-818

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json

The small ribosomal subunit from Thermus thermophilus at 4.5 A resolution: pattern fittings and the identification of a functional site

4 November 2019

cites work

1 reference

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X-ray crystal structures of 70S ribosome functional complexes

20 March 2017

1 reference

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Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit

20 March 2017

1 reference

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Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution

20 March 2017

1 reference

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Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

20 March 2017

1 reference

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A detailed view of a ribosomal active site: the structure of the L11-RNA complex

20 March 2017

1 reference

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Crystal structure of a conserved ribosomal protein-RNA complex

20 March 2017

1 reference

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The three-dimensional structure of the RNA-binding domain of ribosomal protein L2; a protein at the peptidyl transferase center of the ribosome

20 March 2017

1 reference

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The crystal structure of ribosomal protein S4 reveals a two-domain molecule with an extensive RNA-binding surface: one domain shows structural homology to the ETS DNA-binding motif

20 March 2017

1 reference

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Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution

20 March 2017

1 reference

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Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics

20 March 2017

1 reference

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High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA

20 March 2017

1 reference

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The crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus

20 March 2017

1 reference

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Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex

20 March 2017

1 reference

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Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Human ribosomal protein L4: cloning and sequencing of the cDNA and primary structure of the protein

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

The crystal structure of a low-molecular-weight phosphotyrosine protein phosphatase

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein-DNA conformational changes in the crystal structure of a lambda Cro-operator complex

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Raster3D: photorealistic molecular graphics

20 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

20 March 2017

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

The CCP4 suite: programs for protein crystallography

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

ALSCRIPT: a tool to format multiple sequence alignments

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein structure comparison by alignment of distance matrices

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

SCOP: a structural classification of proteins database for the investigation of sequences and structures

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

20 March 2017

1 reference

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The Minimal Gene Complement of Mycoplasma genitalium

20 March 2017

1 reference

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Diverse mechanisms for regulating ribosomal protein synthesis in Escherichia coli

20 March 2017

2 references

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20 March 2017

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Zinc finger-like motifs in rat ribosomal proteins S27 and S29

21 January 2018

1 reference

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The primary structures of rat ribosomal proteins L4 and L41

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Knowledge-based protein secondary structure assignment

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Prediction of protein secondary structure at better than 70% accuracy

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Phylogenetic analysis of L4-mediated autogenous control of the S10 ribosomal protein operon

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

RNA binding strategies of ribosomal proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Precise determination of RNA-protein contact sites in the 50 S ribosomal subunit of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Proteins on ribosome surface: Measurements of protein exposure by hot tritium bombardment technique

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Sequence analysis of a 50 kb region between spo0H and rrnH on the Bacillus subtilis chromosome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Ribosomal proteins and elongation factors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

A hairpin structure upstream of the terminator hairpin required for ribosomal protein L4-mediated attenuation control of the S10 operon of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Crystal structure of the RNA binding ribosomal protein L1 from Thermus thermophilus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Phylogenetic depth of S10 and spc operons: cloning and sequencing of a ribosomal protein gene cluster from the extremely thermophilic bacterium Thermotoga maritima

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Ribosomal protein gene sequence changes in erythromycin-resistant mutants of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Domain I of 23S rRNA competes with a paused transcription complex for ribosomal protein L4 of Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Feedback regulation of ribosomal protein gene expression in Escherichia coli: structural homology of ribosomal RNA and ribosomal protein MRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Precise localization of the site of cross-linking between protein L4 and 23S ribonucleic acid induced by mild ultraviolet irradiation of Escherichia coli 50S ribosomal subunits

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Structure of the Escherichia coli S10 ribosomal protein operon.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

RNA-protein cross-linking in Escherichia coli 50S ribosomal subunits; determination of sites on 23S RNA that are cross-linked to proteins L2, L4, L24 and L27 by treatment with 2-iminothiolane

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Secondary structure of the leader transcript from the Escherichia coli S10 ribosomal protein operon

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

How do proteins recognize specific RNA sites? New clues from autogenously regulated ribosomal proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

High degree of conservation between ribosomal proteins of Yersinia pseudotuberculosis and Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

The functional role of ribosomal RNA in protein synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Translational regulation of the spc operon in Escherichia coli. Identification and structural analysis of the target site for S8 repressor protein

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

A model for the spatial arrangement of the proteins in the large subunit of the Escherichia coli ribosome.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Comparative biochemistry and biophysics of ribosomal proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

The assembly of prokaryotic ribosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

The three-dimensional structure of the ribosome and its components

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Regulation of the Escherichia coli S10 ribosomal protein operon by heterologous L4 ribosomal proteins

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

A self-consistent method for the analysis of protein secondary structure from circular dichroism.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Autogenous control: ribosomal protein L10-L12 complex binds to the leader sequence of its mRNA

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Minimal set of ribosomal components for reconstitution of the peptidyltransferase activity.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Organization and nucleotide sequence of a gene cluster coding for eight ribosomal proteins in the archaebacterium Halobacterium marismortui

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Primary structures of ribosomal proteins L3 and L4 from Bacillus stearothermophilus

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Escherichia coli ribosomal protein L4 stimulates transcription termination at a specific site in the leader of the S10 operon independent of L4-mediated inhibition of translation

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Localization of proteins L4, L5, L20 and L25 on the ribosomal surface by immuno-electron microscopy.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

19 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

Erythromycin resistance mutations in ribosomal proteins L22 and L4 perturb the higher order structure of 23 S ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

The ribosomal protein gene cluster of Mycoplasma capricolum

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

Direct linkage of str-, S10- and spc-related gene clusters in Thermus thermophilus HB8, and sequences of ribosomal proteins L4 and S10.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

Ribosomal protein structures: insights into the architecture, machinery and evolution of the ribosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

A Detailed View of a Ribosomal Active Site

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FEMBOJ%2F19.5.807

Ribosomal protein L4 from Escherichia coli utilizes nonidentical determinants for its structural and regulatory functions.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=305621

Protein L4 of the E. coli ribosome regulates an eleven gene r protein operon

27 November 2018

1 reference

12 December 2020

E. coli ribosomal protein L4 is a feedback regulatory protein

1 reference

12 December 2020

Ribosomal components from Escherichia coli 50 S subunits involved in the reconstitution of peptidyltransferase activity

1 reference

12 December 2020

Erythromycin inhibits the assembly of the large ribosomal subunit in growing Escherichia coli cells

1 reference

12 December 2020

Specific cross-linking of proteins S7 and L4 to ribosomal RNA, by UV irradiation of Escherichia coli ribosomal subunits

1 reference

12 December 2020

The RNA binding domain of ribosomal protein L11 is structurally similar to homeodomains

1 reference

12 December 2020

Structural aspects of protein synthesis

1 reference

12 December 2020

NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif

1 reference

12 December 2020

Identifiers

DOI

10.1093/EMBOJ/19.5.807

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

PubMed publication ID

10698923

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10698923%20AND%20SRC:MED&resulttype=core&format=json