(Q27641450)

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Frank Delaglio

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Nico Tjandra

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Victor B Zhurkin

Journal of Biomolecular NMR

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publication date

August 2003

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published in

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volume

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issue

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page(s)

297-315

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cites work

Sequence-specific binding of counterions to B-DNA.

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12 December 2020

Measurement of homonuclear proton couplings from regular 2D COSY spectra

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12 December 2020

Crystal structure analysis of a complete turn of B-DNA

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12 December 2020

The B-DNA dodecamer at high resolution reveals a spine of water on sodium

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12 December 2020

The Xplor-NIH NMR molecular structure determination package

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12 December 2020

Improving the accuracy of NMR structures of DNA by means of a database potential of mean force describing base-base positional interactions

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12 December 2020

Domain orientation and dynamics in multidomain proteins from residual dipolar couplings

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12 December 2020

Reversible bending and helix geometry in a B-DNA dodecamer: CGCGAATTBrCGCG

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12 December 2020

A bifurcated hydrogen-bonded conformation in the d(A.T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin

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12 December 2020

Carbon-13 NMR in conformational analysis of nucleic acid fragments. 2. A reparametrization of the Karplus equation for vicinal NMR coupling constants in CCOP and HCOP fragments.

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12 December 2020

Crystal studies of B-DNA: the answers and the questions

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12 December 2020

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

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12 December 2020

Analysis of the relative contributions of the nuclear Overhauser interproton distance restraints and the empirical energy function in the calculation of oligonucleotide structures using restrained molecular dynamics

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12 December 2020

Recommendations for the presentation of NMR structures of proteins and nucleic acids. IUPAC-IUBMB-IUPAB Inter-Union Task Group on the Standardization of Data Bases of Protein and Nucleic Acid Structures Determined by NMR Spectroscopy

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12 December 2020

A 5-nanosecond molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation

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12 December 2020

NMR evidence for slow collective motions in cyanometmyoglobin

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12 December 2020

The structure of an oligo(dA).oligo(dT) tract and its biological implications

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12 December 2020

How accurately and precisely can RNA structure be determined by NMR?

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12 December 2020

Structure of a B-DNA dodecamer. III. Geometry of hydration

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12 December 2020

Structural and dynamic analysis of residual dipolar coupling data for proteins

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12 December 2020

Structure of a B-DNA dodecamer: conformation and dynamics

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12 December 2020

Residual dipolar coupling TOCSY for direct through space correlations of base protons and phosphorus nuclei in RNA.

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12 December 2020

Determining local conformational variations in DNA. Nuclear magnetic resonance structures of the DNA duplexes d(CGCCTAATCG) and d(CGTCACGCGC) generated using back-calculation of the nuclear Overhauser effect spectra, a distance geometry algorithm an

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12 December 2020

X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature

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12 December 2020

1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium

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12 December 2020

DNA bending and sequence-dependent backbone conformation NMR and computer experiments

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12 December 2020

Time-averaged nuclear Overhauser effect distance restraints applied to tendamistat

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12 December 2020

Solution structure of the EcoRI DNA sequence: refinement of NMR-derived distance geometry structures by NOESY spectrum back-calculations

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12 December 2020

Systematic study of nuclear Overhauser effects vis-à-vis local helical parameters, sugar puckers, and glycosidic torsions in B DNA: insensitivity of NOE to local transitions in B DNA oligonucleotides due to internal structural compensations

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12 December 2020

Insights into the dynamic nature of DNA duplex structure via analysis of nuclear Overhauser effect intensities

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12 December 2020

DNA bending and sugar switching

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12 December 2020

Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights

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12 December 2020

Interaction of berenil with the EcoRI dodecamer d(CGCGAATTCGCG)2 in solution studied by NMR.

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12 December 2020

Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution

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12 December 2020

Structure of a B-DNA dodecamer. II. Influence of base sequence on helix structure

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12 December 2020

The effect of crystal packing on oligonucleotide double helix structure

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12 December 2020

Orienting domains in proteins using dipolar couplings measured by liquid-state NMR: differences in solution and crystal forms of maltodextrin binding protein loaded with beta-cyclodextrin

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12 December 2020

What is the average conformation of bacteriophage T4 lysozyme in solution? A domain orientation study using dipolar couplings measured by solution NMR.

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12 December 2020

Mechanics of sequence-dependent stacking of bases in B-DNA

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12 December 2020

31P chemical shift anisotropy as an aid in determining nucleic acid structure in liquid crystals

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12 December 2020

Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear overhauser enhancement data and dipolar couplings by rigid body minimization

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12 December 2020

13C-NMR of the deoxyribose sugars in four DNA oligonucleotide duplexes: assignment and structural features.

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12 December 2020

Conformational Variability of Solution Nucelar Magnetic Resonance Structures

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12 December 2020

Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions

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12 December 2020

Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.

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12 December 2020

Application of dipolar coupling data to the refinement of the solution structure of the sarcin-ricin loop RNA.

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12 December 2020

Structural basis for SRY-dependent 46-X,Y sex reversal: modulation of DNA bending by a naturally occurring point mutation

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12 December 2020

Solution structure of an A-tract DNA bend

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12 December 2020

Base sequence and helix structure variation in B and A DNA

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12 December 2020

Furanose sugar conformations in DNA from NMR coupling constants

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12 December 2020

An efficient NMR experiment for analyzing sugar-puckering in unlabeled DNA: application to the 26-kDa dead ringer-DNA complex

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12 December 2020

Measurement of 1H3'-31P dipolar couplings in a DNA oligonucleotide by constant-time NOESY difference spectroscopy

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12 December 2020

Influence of the base sequence on the conformational behaviour of DNA polynucleotides in solution

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12 December 2020

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

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12 December 2020

Refinement of the structure of protein-RNA complexes by residual dipolar coupling analysis

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12 December 2020

Direct refinement against proton-proton dipolar couplings in NMR structure determination of macromolecules

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12 December 2020

Crystal lattice packing is important in determining the bend of a DNA dodecamer containing an adenine tract

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12 December 2020

DNA curvature and deformation in protein-DNA complexes: a step in the right direction

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12 December 2020

Measurement of homonuclear proton couplings based on cross-peak nulling in CT-COSY

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12 December 2020

Direct measurement of 1H-1H dipolar couplings in proteins: a complement to traditional NOE measurements.

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12 December 2020

The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

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12 December 2020

Structure of the potassium form of CGCGAATTCGCG: DNA deformation by electrostatic collapse around inorganic cations

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12 December 2020

MPD and DNA bending in crystals and in solution.

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12 December 2020

DNA structure: what's in charge?

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12 December 2020

Characterization of surfactant liquid crystal phases suitable for molecular alignment and measurement of dipolar couplings

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12 December 2020

Localization of ammonium ions in the minor groove of DNA duplexes in solution and the origin of DNA A-tract bending

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12 December 2020

Magnetic alignment of duplex and quadruplex DNAs

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12 December 2020

Absence of minor groove monovalent cations in the crosslinked dodecamer C-G-C-G-A-A-T-T-C-G-C-G

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12 December 2020

Direct Measurement of Distances and Angles in Biomolecules by NMR in a Dilute Liquid Crystalline Medium

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12 December 2020

Assignment of the non-exchangeable proton resonances of d(C-G-C-G-A-A-T-T-C-G-C-G) using two-dimensional nuclear magnetic resonance methods

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12 December 2020

A comprehensive approach for accurate measurement of proton-proton coupling constants in the sugar ring of DNA.

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12 December 2020