(Q24682719)

22 June 2017

title

Deciphering RNA structural diversity and systematic phylogeny from microbial metagenomes (English)

1 reference

22 June 2017

1 reference

Yanglong Zhu

1 reference

22 June 2017

Dileep K Pulukkunat

series ordinal

1 reference

22 June 2017

Yong Li

series ordinal

1 reference

22 June 2017

language of work or name

English

0 references

publication date

27 March 2007

1 reference

22 June 2017

published in

Nucleic Acids Research

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22 June 2017

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22 June 2017

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22 June 2017

page(s)

2283-2294

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Bioinformatics for whole-genome shotgun sequencing of microbial communities

22 June 2017

cites work

1 reference

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Toward Automatic Reconstruction of a Highly Resolved Tree of Life

7 April 2017

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Crystal structure of the specificity domain of ribonuclease P

7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

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Insights into the genomes of archaea mediating the anaerobic oxidation of methane

28 September 2017

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Metagenomics: DNA sequencing of environmental samples.

28 September 2017

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Protein activation of a ribozyme: the role of bacterial RNase P protein

28 September 2017

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Antitumor polyketide biosynthesis by an uncultivated bacterial symbiont of the marine sponge Theonella swinhoei

28 September 2017

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Reverse methanogenesis: testing the hypothesis with environmental genomics

28 September 2017

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Characterization of large-insert DNA libraries from soil for environmental genomic studies of Archaea.

28 September 2017

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Analysis of a genome fragment of a deep-sea uncultivated Group II euryarchaeote containing 16S rDNA, a spectinomycin-like operon and several energy metabolism genes

28 September 2017

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Fine-scale phylogenetic architecture of a complex bacterial community.

28 September 2017

1 reference

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Metagenomics: from acid mine to shining sea.

28 September 2017

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Comparative analysis of a genome fragment of an uncultivated mesopelagic crenarchaeote reveals multiple horizontal gene transfers

28 September 2017

1 reference

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First insight into the genome of an uncultivated crenarchaeote from soil

28 September 2017

1 reference

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Computational genomics of noncoding RNA genes

28 September 2017

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28 September 2017

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New insight into RNase P RNA structure from comparative analysis of the archaeal RNA.

28 September 2017

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28 September 2017

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Evolutionary variation in bacterial RNase P RNAs

28 September 2017

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In vitro selection for altered divalent metal specificity in the RNase P RNA

28 September 2017

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Structure and evolution of ribonuclease P RNA in Gram-positive bacteria

28 September 2017

1 reference

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Comparative analysis of ribonuclease P RNA structure in Archaea

28 September 2017

1 reference

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Use of photoaffinity crosslinking and molecular modeling to analyze the global architecture of ribonuclease P RNA

28 September 2017

1 reference

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Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli

28 September 2017

1 reference

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Phylogenetic comparative analysis and the secondary structure of ribonuclease P RNA--a review

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

In search of RNase P RNA from microbial genomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Long-Range Structure in Ribonuclease P RNA

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Differentiation of Haemobartonella canis and Mycoplasma haemofelis on the basis of comparative analysis of gene sequences

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Conserved and variable domains within divergent rnase P RNA gene sequences of Prochlorococcus strains

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Application of the Ribonuclease P (RNase P) RNA Gene Sequence for Phylogenetic Analysis of the Genus Saccharomonospora

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Identification of the universally conserved core of ribonuclease P RNA.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1874661

Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17389640

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Crystal structure of the RNA component of bacterial ribonuclease P

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17389640

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Basis for structural diversity in homologous RNAs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17389640

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM057

1 reference

22 June 2017

0 references

1 reference