(Q24670190)

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The structure of the endoribonuclease XendoU: From small nucleolar RNA processing to severe acute respiratory syndrome coronavirus replication

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The structure of the endoribonuclease XendoU: From small nucleolar RNA processing to severe acute respiratory syndrome coronavirus replication (English)

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uridylate-specific endoribonuclease [SARS-Cov]

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based on heuristic

inferred from title

4

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Maurizio Brunori

5

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Beatrice Vallone

object named as

Beatrice Vallone

6

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1

object named as

Fabiana Renzi

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Elisa Caffarelli

2

object named as

Elisa Caffarelli

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3

object named as

Pietro Laneve

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language of work or name

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publication date

15 August 2006

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Proceedings of the National Academy of Sciences of the United States of America

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103

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33

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12365-70

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describes a project that uses

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based on heuristic

inferred from Methods description

Escherichia coli

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based on heuristic

inferred from Methods description

protein purification

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based on heuristic

inferred from Methods description

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based on heuristic

inferred from Methods description

protein crystallization

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based on heuristic

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X-ray crystallography

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based on heuristic

inferred from Methods description

Release of U18 snoRNA from its host intron requires interaction of Nop1p with the Rnt1p endonuclease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Cloning and expression of a cDNA encoding human placental protein 11, a putative serine protease with diagnostic significance as a tumor marker

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Crystal structure of RNase T1 with 3'-guanylic acid and guanosine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Coot: model-building tools for molecular graphics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

The CCP4 suite: programs for protein crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

SOLVE and RESOLVE: automated structure solution and density modification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

The PSIPRED protein structure prediction server

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

https://api.crossref.org/works/10.1073/PNAS.0602426103

22 April 2017

Dali: a network tool for protein structure comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

SCOP: a structural classification of proteins database for the investigation of sequences and structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Biogenesis of small nucleolar ribonucleoproteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

7 April 2017

Functional characterization of XendoU, the endoribonuclease involved in small nucleolar RNA biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

Major genetic marker of nidoviruses encodes a replicative endoribonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

Processing of the intron-encoded U16 and U18 snoRNAs: the conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

The structures of RNase A complexed with 3'-CMP and d(CpA): active site conformation and conserved water molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

In vitro study of processing of the intron-encoded U16 small nucleolar RNA in Xenopus laevis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1567885

28 September 2017

Purification, cloning, and characterization of XendoU, a novel endoribonuclease involved in processing of intron-encoded small nucleolar RNAs in Xenopus laevis

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602426103

21 January 2018

Characterization of the sequences encoding for Xenopus laevis box C/D snoRNP Nop56 protein

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602426103

21 January 2018

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602426103

21 January 2018

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602426103

21 January 2018

The affinity of magnesium binding sites in the Bacillus subtilis RNase P x pre-tRNA complex is enhanced by the protein subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/16895992

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recognition of the T stem-loop of a pre-tRNA substrate by the ribozyme from Bacillus subtilis ribonuclease P

1 reference

https://pubmed.ncbi.nlm.nih.gov/16895992

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.0602426103

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2006PNAS..10312365R

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PubMed publication ID

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