(Q24542357)

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A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase

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A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase (English)

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1

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author name string

Matthew Stephens

2

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publication date

April 2006

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American Journal of Human Genetics

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78

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4

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629-44

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A haplotype map of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

24 March 2017

Inference of population structure using multilocus genotype data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

24 March 2017

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

24 March 2017

A New Statistical Method for Haplotype Reconstruction from Population Data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

24 March 2017

A comparison of bayesian methods for haplotype reconstruction from population genotype data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

7 April 2017

Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputation

1 reference

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7 April 2017

A comparison of phasing algorithms for trios and unrelated individuals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

GERBIL: Genotype resolution and block identification using likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Coalescent-based association mapping and fine mapping of complex trait loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Haplotype reconstruction from genotype data using Imperfect Phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Haplotype inference in random population samples.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

Detecting immigration by using multilocus genotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

27 September 2017

A block-free hidden Markov model for genotypes and its application to disease association.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

29 November 2018

Model-based inference of haplotype block variation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

29 November 2018

Detecting disease associations due to linkage disequilibrium using haplotype tags: a class of tests and the determinants of statistical power

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

29 November 2018

An MDL method for finding haplotype blocks and for estimating the strength of haplotype block boundaries.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1424677

29 November 2018

Bagging predictors

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