Address
:
[go:
up one dir
,
main page
]
Include Form
Remove Scripts
Accept Cookies
Show Images
Show Referer
Rotate13
Base64
Strip Meta
Strip Title
Session Cookies
Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q92955146)
Watch
English
Normal mode analysis and beyond
scientific article published on 29 November 2019
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
review article
1 reference
stated in
Europe PubMed Central
title
Normal mode analysis and beyond
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
author name string
Takahisa Yamato
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
Olivier Laprévote
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
publication date
29 November 2019
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
published in
Biophysics and physicobiology
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
volume
16
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
page(s)
322-327
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
cites work
Energy Exchange Network Model Demonstrates Protein Allosteric Transition: An Application to an Oxygen Sensor Protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Scaling of Rates of Vibrational Energy Transfer in Proteins with Equilibrium Dynamics and Entropy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Normal mode analysis as a method to derive protein dynamics information from the Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Forced Unfolding Mechanism of Bacteriorhodopsin as Revealed by Coarse-Grained Molecular Dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Strain analysis of protein structures and low dimensionality of mechanical allosteric couplings.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Energy exchange network of inter-residue interactions within a thermally fluctuating protein molecule: A computational study.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Vibrational energy flow in the villin headpiece subdomain: master equation simulations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Communication maps of vibrational energy transport through Photoactive Yellow Protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Nonneutral evolution of volume fluctuations in lysozymes revealed by normal-mode analysis of compressibility
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Relaxation mode analysis of a peptide system: comparison with principal component analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Communication maps computed for homodimeric hemoglobin: computational study of water-mediated energy transport in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Ligand-induced conformational change of a protein reproduced by a linear combination of displacement vectors obtained from normal mode analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Slow dynamics in protein fluctuations revealed by time-structure based independent component analysis: the case of domain motions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Molecular mechanism of long-range synergetic color tuning between multiple amino acid residues in conger rhodopsin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Frequency-resolved communication maps for proteins and other nanoscale materials
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Energy flow in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Anisotropic structural relaxation and its correlation with the excess energy diffusion in the incipient process of photodissociated MbCO: high-resolution analysis via ensemble perturbation method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Intramolecular signaling pathways revealed by modeling anisotropic thermal diffusion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Vibrational energy relaxation in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Energy landscape distortions and the mechanical unfolding of proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Normal mode based flexible fitting of high-resolution structure into low-resolution experimental data from cryo-EM.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
ProMode: a database of normal mode analyses on protein molecules with a full-atom model.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Conformational change of proteins arising from normal mode calculations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Vibrational energy transfer in a protein molecule
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Collective NMR relaxation model applied to protein dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Mechanical property of a TIM-barrel protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Strain tensor field in proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Conformational deformation in deoxymyoglobin by hydrostatic pressure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Essential dynamics of proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Effect of solvent on collective motions in globular protein.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Harmonic dynamics of proteins: normal modes and fluctuations in bovine pancreatic trypsin inhibitor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Dynamics of a small globular protein in terms of low-frequency vibrational modes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Compressibility-structure relationship of globular proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Normal modes of vibration in bovine pancreatic trypsin inhibitor and its mechanical property
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Deoxymyoglobin studied by the conformational normal mode analysis. I. Dynamics of globin and the heme-globin interaction.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Projection of Monte Carlo and molecular dynamics trajectories onto the normal mode axes: human lysozyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Normal mode refinement: crystallographic refinement of protein dynamic structure. I. Theory and test by simulated diffraction data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6976091
retrieved
11 February 2021
Identifiers
DOI
10.2142/BIOPHYSICO.16.0_322
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
PMC publication ID
6976091
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
PubMed publication ID
31984187
1 reference
stated in
Europe PubMed Central
PMC publication ID
6976091
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31984187%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 May 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit