(Q58573595)

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Genome-wide characterization of the NRAMP gene family in Phaseolus vulgaris provides insights into functional implications during common bean development

scientific article published on 11 October 2018

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29 April 2020

Genome-wide characterization of the NRAMP gene family in Phaseolus vulgaris provides insights into functional implications during common bean development (English)

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29 April 2020

Phaseolus vulgaris

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Phaseolus vulgaris

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Juliane Karine Ishida

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29 April 2020

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Danielle G G Caldas

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29 April 2020

Lucas Roberto Oliveira

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29 April 2020

Gabriela Campos Frederici

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29 April 2020

Lucas Margato Pereira Leite

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29 April 2020

Tsai Siu Mui

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29 April 2020

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11 October 2018

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29 April 2020

Genetics and Molecular Biology

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29 April 2020

41

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29 April 2020

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29 April 2020

820-833

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29 April 2020

Nramp defines a family of membrane proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

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Nutrition and health implications of dry beans: a review

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Resistance to intracellular infections: comparative genomic analysis of Nramp

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Cloning and characterization of the OsNramp family from Oryza sativa, a new family of membrane proteins possibly implicated in the transport of metal ions

1 reference

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12 December 2020

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Colletotrichum: A model genus for studies on pathology and fungal-plant interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Involvement of NRAMP1 from Arabidopsis thaliana in iron transport.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cadmium and iron transport by members of a plant metal transporter family in Arabidopsis with homology to Nramp genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Characterization of an iron-dependent regulatory sequence involved in the transcriptional control of AtFer1 and ZmFer1 plant ferritin genes by iron

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis IRT2 gene encodes a root-periphery iron transporter

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyphyletic origins of bacterial Nramp transporters.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Iron-dependent regulation of the divalent metal ion transporter

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IRT1, an Arabidopsis transporter essential for iron uptake from the soil and for plant growth

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Consumption of black beans and navy beans (Phaseolus vulgaris) reduced azoxymethane-induced colon cancer in rats

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The soybean NRAMP homologue, GmDMT1, is a symbiotic divalent metal transporter capable of ferrous iron transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transition metal transporters in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Infection and invasion of roots by symbiotic, nitrogen-fixing rhizobia during nodulation of temperate legumes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

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Cloning of three ZIP/Nramp transporter genes from a Ni hyperaccumulator plant Thlaspi japonicum and their Ni2+-transport abilities

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mobilization of vacuolar iron by AtNRAMP3 and AtNRAMP4 is essential for seed germination on low iron.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GenePattern 2.0

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The NRAMP family of metal-ion transporters

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The iron-responsive element (IRE)/iron-regulatory protein 1 (IRP1)-cytosolic aconitase iron-regulatory switch does not operate in plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Locating proteins in the cell using TargetP, SignalP and related tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Primer3Plus, an enhanced web interface to Primer3

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How rhizobial symbionts invade plants: the Sinorhizobium-Medicago model

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A gene expression atlas of the model legume Medicago truncatula.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systemic iron homeostasis and the iron-responsive element/iron-regulatory protein (IRE/IRP) regulatory network

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple sequence alignment using ClustalW and ClustalX

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional characterization of NRAMP3 and NRAMP4 from the metal hyperaccumulator Thlaspi caerulescens.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes?

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations in the gene encoding DMT1: clinical presentation and treatment.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Manganese (Mn) and iron (Fe): interdependency of transport and regulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The suspensor: not just suspending the embryo

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nutritional immunity beyond iron: a role for manganese and zinc.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Export of vacuolar manganese by AtNRAMP3 and AtNRAMP4 is required for optimal photosynthesis and growth under manganese deficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SIREs: searching for iron-responsive elements.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plasma membrane-localized transporter for aluminum in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The OsNRAMP1 iron transporter is involved in Cd accumulation in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Validation of reference genes for RT-qPCR normalization in common bean during biotic and abiotic stresses

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant genes involved in harbouring symbiotic rhizobia or pathogenic nematodes

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

H(+)-coupled divalent metal-ion transporter-1: functional properties, physiological roles and therapeutics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic relationships and selective pressure on gene families related to iron homeostasis in land plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative genomic and transcriptomic analyses reveal the hemibiotrophic stage shift of Colletotrichum fungi

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nutritional quality of legumes, and their role in cardiometabolic risk prevention: a review.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression in Arabidopsis and cellular localization reveal involvement of rice NRAMP, OsNRAMP1, in arsenic transport and tolerance

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A node-based switch for preferential distribution of manganese in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Iron: an essential micronutrient for the legume-rhizobium symbiosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A reference genome for common bean and genome-wide analysis of dual domestications

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An RNA-Seq based gene expression atlas of the common bean

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of a SLC11 (NRAMP) transporter reveals the basis for transition-metal ion transport

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GSDS 2.0: an upgraded gene feature visualization server

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Medicago truncatula natural resistance-associated macrophage Protein1 is required for iron uptake by rhizobia-infected nodule cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nramp1 and Other Transporters Involved in Metal Withholding during Infection

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In silico analysis of Mn transporters (NRAMP1) in various plant species.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Toxic Heavy Metal and Metalloid Accumulation in Crop Plants and Foods

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The HvNramp5 Transporter Mediates Uptake of Cadmium and Manganese, But Not Iron

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two NRAMP6 Isoforms Function as Iron and Manganese Transporters and Contribute to Disease Resistance in Rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-Wide Identification and Expression Analysis of NRAMP Family Genes in Soybean (Glycine Max L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/30334565

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1590/1678-4685-GMB-2017-0272

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29 April 2020

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30334565%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

PubMed publication ID

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30334565%20AND%20SRC:MED&resulttype=core&format=json

29 April 2020

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