(Q58451373)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11021542%20AND%20SRC:MED&resulttype=core&format=json

31 October 2019

title

An automatic homology modeling method consisting of database searches and simulated annealing (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11021542%20AND%20SRC:MED&resulttype=core&format=json

31 October 2019

1 reference

0 references

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31 October 2019

Umeyama H

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31 October 2019

publication date

1 June 2000

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11021542%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Graphics & Modelling

31 October 2019

published in

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31 October 2019

volume

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31 October 2019

issue

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31 October 2019

page(s)

258-72, 305-6

1 reference

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Conformations of folded proteins in restricted spaces

31 October 2019

cites work

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Elucidation of the cause for reduced activity of abnormal human plasmin containing an Ala55-Thr mutation: importance of highly conserved Ala55 in serine proteases

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Knowledge-based prediction of protein structures and the design of novel molecules

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7 January 2021

Comparative modeling methods: application to the family of the mammalian serine proteases

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7 January 2021

Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors.

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7 January 2021

Accurate modeling of protein conformation by automatic segment matching

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7 January 2021

A Computer Modeling Study of the Interaction Between Tissue Factor Pathway Inhibitor and Blood Coagulation Factor Xa

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7 January 2021

A graph-theoretic algorithm for comparative modeling of protein structure

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Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

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Prediction of protein side-chain conformation by packing optimization.

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7 January 2021

Fast and simple Monte Carlo algorithm for side chain optimization in proteins: application to model building by homology

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7 January 2021

The dead-end elimination theorem and its use in protein side-chain positioning

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7 January 2021

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

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Determinants of protein side-chain packing

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7 January 2021

Prediction of protein side-chain conformations by principal component analysis for fixed main-chain atoms.

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An all atom force field for simulations of proteins and nucleic acids

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7 January 2021

Comparative protein modelling by satisfaction of spatial restraints

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7 January 2021

ICM?A new method for protein modeling and design: Applications to docking and structure prediction from the distorted native conformation

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Prediction of polyelectrolyte polypeptide structures using Monte Carlo conformational search methods with implicit solvation modeling

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7 January 2021

Homology modeling using simulated annealing of restrained molecular dynamics and conformational search calculations with CONGEN: application in predicting the three-dimensional structure of murine homeodomain Msx-1.

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7 January 2021

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7 January 2021

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels

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7 January 2021

Touring protein fold space with Dali/FSSP

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7 January 2021

Identification of common molecular subsequences

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7 January 2021

A Structural Basis for Sequence Comparisons

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7 January 2021

Derivation of rules for comparative protein modeling from a database of protein structure alignments

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7 January 2021

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11021542%20AND%20SRC:MED&resulttype=core&format=json

31 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11021542%20AND%20SRC:MED&resulttype=core&format=json