(Q42772904)

7 November 2017

title

Total RNA sequencing reveals nascent transcription and widespread co-transcriptional splicing in the human brain (English)

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7 November 2017

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7 November 2017

Ulf Gyllensten

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7 November 2017

Ammar Zaghlool

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7 November 2017

Jonatan Halvardson

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7 November 2017

Anna Wetterbom

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7 November 2017

Lucia Cavelier

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7 November 2017

Lars Feuk

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7 November 2017

language of work or name

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6 November 2011

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Nature Structural & Molecular Biology

7 November 2017

published in

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7 November 2017

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7 November 2017

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7 November 2017

page(s)

1435-1440

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

7 November 2017

cites work

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

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Identification of novel exons and transcribed regions by chimpanzee transcriptome sequencing

21 January 2018

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Most "dark matter" transcripts are associated with known genes

21 January 2018

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The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNA

21 January 2018

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Nascent transcript sequencing visualizes transcription at nucleotide resolution

21 January 2018

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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

21 January 2018

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A wave of nascent transcription on activated human genes

21 January 2018

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Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors

21 January 2018

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Co-transcriptional splicing of pre-messenger RNAs: considerations for the mechanism of alternative splicing

21 January 2018

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Multiple links between transcription and splicing

21 January 2018

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Splicing of Balbiani ring 1 gene pre-mRNA occurs simultaneously with transcription.

21 January 2018

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Splice site selection, rate of splicing, and alternative splicing on nascent transcripts

21 January 2018

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RNP particles at splice junction sequences on Drosophila chorion transcripts.

21 January 2018

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Global Analysis of Nascent RNA Reveals Transcriptional Pausing in Terminal Exons

21 January 2018

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Co-transcriptional splicing of constitutive and alternative exons

21 January 2018

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Rates of in situ transcription and splicing in large human genes

21 January 2018

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Widespread transcription at neuronal activity-regulated enhancers

21 January 2018

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First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal

21 January 2018

1 reference

Long pre-mRNA depletion and RNA missplicing contribute to neuronal vulnerability from loss of TDP-43.

21 January 2018

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Identification of neuronal RNA targets of TDP-43-containing ribonucleoprotein complexes

21 January 2018

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Characterizing the RNA targets and position-dependent splicing regulation by TDP-43.

21 January 2018

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Nova regulates brain-specific splicing to shape the synapse

21 January 2018

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Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls

21 January 2018

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Response to “The Reality of Pervasive Transcription”

21 January 2018

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A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons

21 January 2018

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Neuronal regulation of alternative pre-mRNA splicing

21 January 2018

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Sporadic ALS has compartment-specific aberrant exon splicing and altered cell-matrix adhesion biology

21 January 2018

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The splice of life: alternative splicing and neurological disease

21 January 2018

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Disruption of neurexin 1 associated with autism spectrum disorder

21 January 2018

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Structural variation of chromosomes in autism spectrum disorder

21 January 2018

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Methionine sulfoxide reductase: a novel schizophrenia candidate gene

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Mutations in autism susceptibility candidate 2 (AUTS2) in patients with mental retardation.

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Genome-wide copy number variation in epilepsy: novel susceptibility loci in idiopathic generalized and focal epilepsies

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Comparative genome hybridization suggests a role for NRXN1 and APBA2 in schizophrenia

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Recurrent CNVs disrupt three candidate genes in schizophrenia patients

21 January 2018

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Rare structural variants found in attention-deficit hyperactivity disorder are preferentially associated with neurodevelopmental genes

21 January 2018

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Family-based genome-wide association scan of attention-deficit/hyperactivity disorder

21 January 2018

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Resistance to change and vulnerability to stress: autistic-like features of GAP43-deficient mice.

21 January 2018

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

21 January 2018

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Global and unbiased detection of splice junctions from RNA-seq data

21 January 2018

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21 January 2018

Splicing on the brain

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Assembly and disassembly of spliceosomes along a specific pre-messenger RNP fiber.

31 March 2020

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Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

31 March 2020

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RNA-binding proteins switch gears to drive alternative splicing in neurons

31 March 2020

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Disruption of the neurexin 1 gene is associated with schizophrenia

31 March 2020

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The human genome browser at UCSC

31 March 2020

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SICTIN: Rapid footprinting of massively parallel sequencing data

31 March 2020

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The intranuclear site of excision of each intron in Balbiani ring 3 pre-mRNA is influenced by the time remaining to transcription termination and different excision efficiencies for the various introns.

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22056773

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.2143

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Dimensions Publication ID

7 November 2017

1050633589

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