(Q42159014)

17 October 2017

TOPCONS: consensus prediction of membrane protein topology (English)

1 reference

17 October 2017

1 reference

1 reference

17 October 2017

Andreas Bernsel

1 reference

17 October 2017

Håkan Viklund

series ordinal

1 reference

17 October 2017

Aron Hennerdal

series ordinal

1 reference

17 October 2017

8 May 2009

1 reference

17 October 2017

Nucleic Acids Research

1 reference

17 October 2017

1 reference

17 October 2017

Web Server issue

1 reference

17 October 2017

W465-8

1 reference

Prediction of membrane-protein topology from first principles

17 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Improving the accuracy of transmembrane protein topology prediction using evolutionary information

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

PONGO: a web server for multiple predictions of all-alpha transmembrane proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

ConPred II: a consensus prediction method for obtaining transmembrane topology models with high reliability.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

A combined transmembrane topology and signal peptide prediction method

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

The HMMTOP transmembrane topology prediction server

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Basic local alignment search tool

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Molecular code for transmembrane-helix recognition by the Sec61 translocon

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Reliability measures for membrane protein topology prediction algorithms.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

A consensus procedure for predicting the location of alpha-helical transmembrane segments in proteins.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703981

Consensus predictions of membrane protein topology

17 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKP363

FlyBase: genes and gene models

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKP363

MemO: a consensus approach to the annotation of a protein's membrane organization

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19429891

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKP363

1 reference

journals/nar/BernselVHE09

17 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

17 October 2017

PubMed publication ID

19429891

1 reference