(Q40807341)

English

One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples

scientific article published on 11 January 2016

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scholarly article

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Europe PubMed Central

PMC publication ID

23 September 2017

One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix® and RotaTeq®) in stool samples (English)

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

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Slavica Mijatovic-Rustempasic

2

object named as

Slavica Mijatovic-Rustempasic

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

author name string

Rashi Gautam

1

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

Mathew D Esona

3

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

Ka Ian Tam

4

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

Osbourne Quaye

5

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

Michael D Bowen

6

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

publication date

11 January 2016

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

4

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Europe PubMed Central

PMC publication ID

23 September 2017

e1560

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

copyright license

Creative Commons CC0 License

11 January 2016

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April 2022 Public Data File from Crossref

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copyrighted, dedicated to the public domain by copyright holder

0 references

Molecular genotyping and quantitation assay for rotavirus surveillance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Real-time RT-PCR assays to differentiate wild-type group A rotavirus strains from Rotarix(®) and RotaTeq(®) vaccine strains in stool samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Evidence of vaccine-related reassortment of rotavirus, Brazil, 2008-2010.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Comparative evaluation of commercially available manual and automated nucleic acid extraction methods for rotavirus RNA detection in stools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Sensitive and specific quantitative detection of rotavirus a by one-step real-time reverse transcription-PCR assay without antecedent double-stranded-RNA denaturation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

A laboratory-developed TaqMan Array Card for simultaneous detection of 19 enteropathogens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Symptomatic infection and detection of vaccine and vaccine-reassortant rotavirus strains in 5 children: a case series

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Systematic review of regional and temporal trends in global rotavirus strain diversity in the pre rotavirus vaccine era: insights for understanding the impact of rotavirus vaccination programs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Vaccine-derived NSP2 segment in rotaviruses from vaccinated children with gastroenteritis in Nicaragua.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Evaluation of a multiplex real time reverse transcription PCR assay for the detection and quantitation of the most common human rotavirus genotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Detection of fecal shedding of rotavirus vaccine in infants following their first dose of pentavalent rotavirus vaccine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Multiplex reverse transcription PCR Luminex assay for detection and quantitation of viral agents of gastroenteritis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

The use of bovine serum albumin to improve the RT-qPCR detection of foodborne viruses rinsed from vegetable surfaces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Real-world Impact of Rotavirus Vaccination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Novel light-upon-extension real-time PCR assay for simultaneous detection, quantification, and genogrouping of group A rotavirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Vaccine-acquired rotavirus in infants with severe combined immunodeficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Rotavirus disease and vaccination: impact on genotype diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

RotaC: a web-based tool for the complete genome classification of group A rotaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Rotavirus vaccines: viral shedding and risk of transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Enhancement of detection and quantification of rotavirus in stool using a modified real-time RT-PCR assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Sensitive detection of multiple rotavirus genotypes with a single reverse transcription-real-time quantitative PCR assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Real-time reverse transcription-PCR for detection of rotavirus and adenovirus as causative agents of acute viral gastroenteritis in children

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Full genomic analysis of human rotavirus strain B4106 and lapine rotavirus strain 30/96 provides evidence for interspecies transmission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Novel rotavirus VP7 typing assay using a one-step reverse transcriptase PCR protocol and product sequencing and utility of the assay for epidemiological studies and strain characterization, including serotype subgroup analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Quantitation of group A rotavirus by real-time reverse-transcription-polymerase chain reaction: correlation with clinical severity in children in South India.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Rotavirus typing methods and algorithms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Detection and genotyping of human group A rotaviruses by oligonucleotide microarray hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Amino acid substitution within the VP7 protein of G2 rotavirus strains associated with failure to serotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Characterization of rotavirus strains from newborns in New Delhi, India

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Multiple sequence alignment with hierarchical clustering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Identification of group A rotavirus gene 4 types by polymerase chain reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

24 September 2017

Highly sensitive detection of the group A Rotavirus using Apolipoprotein H-coated ELISA plates compared to quantitative real-time PCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

15 June 2018

Rotavirus genotypes co-circulating in Europe between 2006 and 2009 as determined by EuroRotaNet, a pan-European collaborative strain surveillance network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

15 June 2018

Detection and genotyping of human rotavirus VP4 and VP7 genes by reverse transcriptase PCR and reverse hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

15 June 2018

Rotavirus vaccine-derived shedding and viral reassortants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Identification of an avian group A rotavirus containing a novel VP4 gene with a close relationship to those of mammalian rotaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Hospital-based surveillance of rotavirus and other viral agents of diarrhea in children and adults in Russia, 2005-2007.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Broadly reactive TaqMan assay for real-time RT-PCR detection of rotavirus in clinical and environmental samples. JIN2@cdc.gov.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Assessment of the quantitative real-time polymerase chain reaction using a cDNA standard for human group A rotavirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Rotavirus genotyping: keeping up with an evolving population of human rotaviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4734446

19 August 2018

Horizontal transmission of a human rotavirus vaccine strain--a randomized, placebo-controlled study in twins

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of strains of RotaTeq rotavirus vaccine in infants with gastroenteritis following routine vaccination

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rotavirus vaccine induced diarrhea in a child with severe combined immune deficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vaccine-derived human-bovine double reassortant rotavirus in infants with acute gastroenteritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Methods of Rotavirus Detection, Sero- and Genotyping, Sequencing, and Phylogenetic Analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sibling transmission of vaccine-derived rotavirus (RotaTeq) associated with rotavirus gastroenteritis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rotavirus subgroup characterisation by restriction endonuclease digestion of a cDNA fragment of the VP6 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An internally controlled, one-step, real-time RT-PCR assay for norovirus detection and genogrouping

1 reference

https://pubmed.ncbi.nlm.nih.gov/26839745

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.7717/PEERJ.1560

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

23 September 2017

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