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Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20418882%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors (English)

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1 February 2020

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Patrick A Cassiday

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1 February 2020

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Andrew J Oler

1

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1 February 2020

Ravi K Alla

2

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1 February 2020

Douglas N Roberts

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1 February 2020

Alexander Wong

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1 February 2020

Peter C Hollenhorst

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1 February 2020

Katherine J Chandler

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1 February 2020

Cassie A Nelson

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1 February 2020

Curt H Hagedorn

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1 February 2020

Barbara J Graves

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1 February 2020

Bradley R Cairns

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1 February 2020

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25 April 2010

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1 February 2020

Nature Structural & Molecular Biology

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1 February 2020

17

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1 February 2020

5

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1 February 2020

620-628

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1 February 2020

https://scigraph.springernature.com/pub.10.1038/nsmb.1801

0 references

DNA specificity determinants associate with distinct transcription factor functions

1 reference

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28 July 2018

Chromatin poises miRNA- and protein-coding genes for expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Transcription independent insulation at TFIIIC-dependent insulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Distinctive chromatin in human sperm packages genes for embryo development

1 reference

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28 July 2018

Developmental programming of CpG island methylation profiles in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

C19MC microRNAs are processed from introns of large Pol-II, non-protein-coding transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Histone modifications at human enhancers reflect global cell-type-specific gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

RNA polymerases I and III, non-coding RNAs and cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Combinatorial patterns of histone acetylations and methylations in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Dynamic regulation of nucleosome positioning in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

High-resolution mapping and characterization of open chromatin across the genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Extragenic accumulation of RNA polymerase II enhances transcription by RNA polymerase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

The expanding RNA polymerase III transcriptome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

CHD8 associates with human Staf and contributes to efficient U6 RNA polymerase III transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Novel rapidly evolving hominid RNAs bind nuclear factor 90 and display tissue-restricted distribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

A mammalian microRNA expression atlas based on small RNA library sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Subtractive hybridization identifies novel differentially expressed ncRNA species in EBV-infected human B cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide dynamics of SAPHIRE, an essential complex for gene activation and chromatin boundaries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Quantifying similarity between motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Integration of nutritional and stress signaling pathways by Maf1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

RNA polymerase III transcribes human microRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Genome-wide location of yeast RNA polymerase III transcription machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Purifying mRNAs with a high-affinity eIF4E mutant identifies the short 3' poly(A) end phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Direct regulation of RNA polymerase III transcription by RB, p53 and c-Myc.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Direct activation of RNA polymerase III transcription by c-Myc

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2945309

28 July 2018

Recruitment of RNA polymerase III to its target promoters

1 reference

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28 July 2018

The RNA polymerase III transcription apparatus

1 reference

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28 July 2018

RNA polymerase III. Genes, factors and transcriptional specificity.

1 reference

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28 July 2018

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1 reference

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1 reference

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28 July 2018

TFIIIC binding sites function as both heterochromatin barriers and chromatin insulators in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1801

21 January 2018

High-resolution profiling of histone methylations in the human genome

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1801

21 January 2018

The RNA polymerase III transcriptome revealed by genome-wide localization and activity-occupancy relationships.

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1801

21 January 2018

Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information

1 reference

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Non-coding RNA production by RNA polymerase III is implicated in cancer

1 reference

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31 March 2020

A role for TFIIIC transcription factor complex in genome organization

1 reference

https://api.crossref.org/works/10.1038%2FNSMB.1801

31 March 2020

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10.1038/NSMB.1801

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Europe PubMed Central

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1 February 2020

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Europe PubMed Central

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1 February 2020

PubMed publication ID

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Europe PubMed Central

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1 February 2020

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