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Long Noncoding RNAs: A New Regulatory Code in Metabolic Control
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PubMed
title
Long Noncoding RNAs: A New Regulatory Code in Metabolic Control
(English)
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stated in
PubMed
author name string
Xu-Yun Zhao
series ordinal
1
1 reference
stated in
Crossref
Jiandie D. Lin
series ordinal
2
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stated in
Crossref
language of work or name
English
1 reference
stated in
PubMed
publication date
October 2015
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stated in
PubMed
published in
Trends in Biochemical Sciences
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stated in
PubMed
volume
40
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stated in
PubMed
issue
10
1 reference
stated in
PubMed
page(s)
586-96
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stated in
PubMed
cites work
A cytoplasmic NF-κB interacting long noncoding RNA blocks IκB phosphorylation and suppresses breast cancer metastasis
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The noncoding RNA revolution-trashing old rules to forge new ones
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Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs
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MicroRNA networks regulate development of brown adipocytes
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Genome regulation by long noncoding RNAs.
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A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy
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The Long Noncoding RNA, Jpx, Is a Molecular Switch for X Chromosome Inactivation
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Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
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PRDM16 controls a brown fat/skeletal muscle switch
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The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator
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The transcriptional activity of human Chromosome 22
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lincRNAs act in the circuitry controlling pluripotency and differentiation
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De Novo Reconstruction of Adipose Tissue Transcriptomes Reveals Long Non-coding RNA Regulators of Brown Adipocyte Development
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Transcriptome analysis reveals the potential contribution of long noncoding RNAs to brown adipocyte differentiation
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A liver-enriched long non-coding RNA, lncLSTR, regulates systemic lipid metabolism in mice.
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Long noncoding RNA HULC modulates abnormal lipid metabolism in hepatoma cells through an miR-9-mediated RXRA signaling pathway
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Differential lncRNA expression profiles in brown and white adipose tissues
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A long noncoding RNA transcriptional regulatory circuit drives thermogenic adipocyte differentiation
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29 September 2017
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Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins
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29 September 2017
Genome-wide mapping of RNA structure using nuclease digestion and high-throughput sequencing
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Long noncoding RNAs: cellular address codes in development and disease
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Structure and function of long noncoding RNAs in epigenetic regulation
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Xist RNA is a potent suppressor of hematologic cancer in mice
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Long noncoding RNAs regulate adipogenesis
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Adaptive thermogenesis in adipocytes: is beige the new brown?
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Braveheart, a long noncoding RNA required for cardiovascular lineage commitment
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Pleiotropic actions of insulin resistance and inflammation in metabolic homeostasis
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
A SWI/SNF chromatin-remodeling complex acts in noncoding RNA-mediated transcriptional silencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
retrieved
29 September 2017
The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
retrieved
29 September 2017
Circadian oscillations of protein-coding and regulatory RNAs in a highly dynamic mammalian liver epigenome
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
HELLP babies link a novel lincRNA to the trophoblast cell cycle
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Regulation of mammalian cell differentiation by long non-coding RNAs
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Long noncoding RNAs with snoRNA ends
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Research resource: RNA-Seq reveals unique features of the pancreatic β-cell transcriptome.
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29 September 2017
Mechanisms of inflammatory responses in obese adipose tissue
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
The cellular and signaling networks linking the immune system and metabolism in disease
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
The genomic binding sites of a noncoding RNA.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Inflammatory links between obesity and metabolic disease
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Identification of inducible brown adipocyte progenitors residing in skeletal muscle and white fat.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
The changed metabolic world with human brown adipose tissue: therapeutic visions.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Human brown adipose tissue
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Chronic peroxisome proliferator-activated receptor gamma (PPARgamma) activation of epididymally derived white adipocyte cultures reveals a population of thermogenically competent, UCP1-containing adipocytes molecularly distinct from classic [...]
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Screening non-coding RNAs in transcriptomes from neglected species using PORTRAIT: case study of the pathogenic fungus Paracoccidioides brasiliensis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
retrieved
29 September 2017
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
retrieved
29 September 2017
Myogenic gene expression signature establishes that brown and white adipocytes originate from distinct cell lineages.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
retrieved
29 September 2017
Characterization of HULC, a novel gene with striking up-regulation in hepatocellular carcinoma, as noncoding RNA.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Critical role for Ebf1 and Ebf2 in the adipogenic transcriptional cascade
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Monogenic obesity in humans
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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29 September 2017
Evidence for two types of brown adipose tissue in humans.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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27 November 2018
Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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27 November 2018
Characterization of the adipocyte cellular lineage in vivo
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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27 November 2018
Increased Inflammatory Properties of Adipose Tissue Macrophages Recruited During Diet-Induced Obesity
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4584418
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27 November 2018
Role for antisense RNA in regulating circadian clock function in Neurospora crassa
1 reference
stated in
PubMed
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retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.TIBS.2015.08.002
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2869220
Fatcat ID
release_knbgzacrgja5jl4kfcsm7vnxkq
0 references
OpenCitations bibliographic resource ID
2869220
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2869220
PMC publication ID
4584418
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2869220
PubMed publication ID
26410599
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2869220
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