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Ernst Houtgast
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2010 – 2019
- 2019
- [b1]Ernst Joachim Houtgast:
On Hardware-Accelerated Maximally-Efficient Systolic Arrays: Acceleration and Optimization of Genomics Pipelines Through Hardware/Software Co-Design. Delft University of Technology, Netherlands, 2019 - 2018
- [j2]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths. Comput. Biol. Chem. 75: 54-64 (2018) - [c10]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics: A Case Study of Accelerating the Smith-Waterman Algorithm for BWA-MEM. BIBE 2018: 243-246 - 2017
- [c9]Ernst Houtgast, Vlad Mihai Sima, Zaid Al-Ars:
High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL. BIBE 2017: 492-496 - 2016
- [j1]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
An Efficient GPUAccelerated Implementation of Genomic Short Read Mapping with BWAMEM. SIGARCH Comput. Archit. News 44(4): 38-43 (2016) - [c8]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing. ARCS 2016: 130-142 - [c7]Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms. FCCM 2016: 28 - [c6]Ernst Joachim Houtgast, Vlad Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars:
Power-efficiency analysis of accelerated BWA-MEM implementations on heterogeneous computing platforms. ReConFig 2016: 1-8 - 2015
- [c5]Nauman Ahmed, Vlad Mihai Sima, Ernst Houtgast, Koen Bertels, Zaid Al-Ars:
Heterogeneous Hardware/Software Acceleration of the BWA-MEM DNA Alignment Algorithm. ICCAD 2015: 240-246 - [c4]Ernst Joachim Houtgast, Vlad Mihai Sima, Koen Bertels, Zaid Al-Ars:
An FPGA-based systolic array to accelerate the BWA-MEM genomic mapping algorithm. SAMOS 2015: 221-227 - 2011
- [c3]Sebastián Isaza, Ernst Houtgast, Friman Sánchez, Alex Ramírez, Georgi Gaydadjiev:
Scaling HMMER Performance on Multicore Architectures. CISIS 2011: 618-623 - [c2]Sebastián Isaza, Ernst Houtgast, Georgi Gaydadjiev:
HMMER Performance Model for Multicore Architectures. DSD 2011: 257-261
2000 – 2009
- 2009
- [p1]Zachary Wartell, Ernst Houtgast, Onno Pfeiffer, Christopher D. Shaw, William Ribarsky, Frits H. Post:
Interaction Volume Management in a Multi-scale Virtual Environment. Advances in Information and Intelligent Systems 2009: 327-349 - 2005
- [c1]Ernst Houtgast, Onno Pfeiffer, Zachary Wartell, William Ribarsky, Frits H. Post:
Navigation and Interaction in a Multi-Scale Stereoscopic Environment. VR 2005: 275-276
Coauthor Index
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