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Takatomo Fujisawa
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2020 – today
- 2023
- [j19]Yasuhiro Tanizawa
, Takatomo Fujisawa, Yuichi Kodama
DNA Data Bank of Japan (DDBJ) update report 2022. Nucleic Acids Res. 51(D1): 101-105 (2023) - [c3]Yasunori Yamamoto, Takatomo Fujisawa:
To build densely connected Web of RDF data. SWAT4HCLS 2023: 120-121 - [c2]Shuichi Kawashima, Takatomo Fujisawa, Toshiaki Katayama:
Genome Variation Ontology for annotation of complex structural variations. SWAT4HCLS 2023: 126-127 - 2022
- [j18]Toshihisa Okido
DNA Data Bank of Japan (DDBJ) update report 2021. Nucleic Acids Res. 50(D1): 102-105 (2022) - 2021
- [j17]Asami Fukuda
DDBJ update: streamlining submission and access of human data. Nucleic Acids Res. 49(Database-Issue): D71-D75 (2021) - 2020
- [j16]Osamu Ogasawara
DDBJ Database updates and computational infrastructure enhancement. Nucleic Acids Res. 48(Database-Issue): D45-D50 (2020) - [i2]Rutger A. Vos
BioHackathon 2015: Semantics of data for life sciences and reproducible research. F1000Research 9: 136 (2020)
2010 – 2019
- 2019
- [j15]Toshiaki Katayama
TogoGenome/TogoStanza: modularized Semantic Web genome database. Database J. Biol. Databases Curation 2019: bay132 (2019) - [i1]Toshiaki Katayama
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. F1000Research 8: 1677 (2019) - 2018
- [j14]Yasuhiro Tanizawa, Takatomo Fujisawa, Yasukazu Nakamura
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication. Bioinform. 34(6): 1037-1039 (2018) - 2017
- [j13]Jun Mashima
DNA Data Bank of Japan. Nucleic Acids Res. 45(Database-Issue): D25-D31 (2017) - [j12]Takatomo Fujisawa, Rei Narikawa, Shin-ichi Maeda, Satoru Watanabe, Yu Kanesaki
CyanoBase: a large-scale update on its 20th anniversary. Nucleic Acids Res. 45(Database-Issue): D551-D554 (2017) - 2016
- [j11]Jerven T. Bolleman
FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation. J. Biomed. Semant. 7: 39 (2016) - [j10]Jun Mashima
DNA data bank of Japan (DDBJ) progress report. Nucleic Acids Res. 44(Database-Issue): 51-57 (2016) - 2015
- [j9]Kiyoko F. Aoki-Kinoshita
Implementation of linked data in the life sciences at BioHackathon 2011. J. Biomed. Semant. 6: 3 (2015) - [j8]Yuichi Kodama
The DDBJ Japanese Genotype-phenotype Archive for genetic and phenotypic human data. Nucleic Acids Res. 43(Database-Issue): 18-22 (2015) - [j7]Damian Smedley, Syed Haider, Steffen Durinck, Luca Pandini, Paolo Provero, James E. Allen
The BioMart community portal: an innovative alternative to large, centralized data repositories. Nucleic Acids Res. 43(Webserver-Issue): W589-W598 (2015) - 2014
- [j6]Takehide Kosuge, Jun Mashima
DDBJ progress report: a new submission system for leading to a correct annotation. Nucleic Acids Res. 42(Database-Issue): 44-49 (2014) - [j5]Takatomo Fujisawa, Shinobu Okamoto, Toshiaki Katayama, Mitsuteru Nakao, Hidehisa Yoshimura, Hiromi Kajiya-Kanegae
CyanoBase and RhizoBase: databases of manually curated annotations for cyanobacterial and rhizobial genomes. Nucleic Acids Res. 42(Database-Issue): 666-670 (2014) - 2013
- [j4]Eli Kaminuma, Takatomo Fujisawa, Yasuhiro Tanizawa, Naoko Sakamoto, Nori Kurata, Tokurou Shimizu, Yasukazu Nakamura
H2DB: a heritability database across multiple species by annotating trait-associated genomic loci. Nucleic Acids Res. 41(Database-Issue): 880-884 (2013) - 2012
- [c1]Toshiaki Katayama, Shinobu Okamoto, Shuichi Kawashima, Hiroshi Mori, Takatomo Fujisawa:
Semantic Integration of the Genome Annotations. SWAT4LS 2012 - 2011
- [j3]Jonathan M. Guberman, Jiye Ai, Olivier Arnaiz
BioMart Central Portal: an open database network for the biological community. Database J. Biol. Databases Curation 2011 (2011) - [j2]Toshiaki Katayama, Mark D. Wilkinson
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011) - 2010
- [j1]Mitsuteru Nakao, Shinobu Okamoto, Mitsuyo Kohara, Tsunakazu Fujishiro, Takatomo Fujisawa, Shusei Sato
CyanoBase: the cyanobacteria genome database update 2010. Nucleic Acids Res. 38(Database-Issue): 379-381 (2010)
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