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Frank Oliver Glöckner
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- affiliation: Max-Planck-Institut für Marine Mikrobiologie, Bremen, Germany
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2020 – today
- 2023
- [c5]Michael Diepenbroek
, Ivaylo Kostadinov
Towards a Research Data Commons in the German National Research Data Infrastructure NFDI: Vision, Governance, Architecture. CoRDI 2023 - [c4]Barbara Ebert
Connecting National and International Data Infrastructures in Biodiversity Research The Case of NFDI4Biodiversity, a German Consortium for Biodiversity, Ecology and Environmental Data. CoRDI 2023 - 2021
- [j23]Gerhard Mayer
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases. Briefings Bioinform. 22(5) (2021) - [i2]Robert M. Waterhouse, Anne-Françoise Adam-Blondon, Donat Agosti, Petr Baldrian, Bachir Balech
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR. F1000Research 10: 1238 (2021) - 2020
- [j22]Hendrikje Seifert, Marc Weber, Frank Oliver Glöckner, Ivaylo Kostadinov
An open-source GIS-enabled lookup service for Nagoya Protocol party information. Database J. Biol. Databases Curation 2020 (2020) - [j21]Rachel Drysdale, Charles E. Cook
The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences. Bioinform. 36(8): 2636-2642 (2020)
2010 – 2019
- 2019
- [j20]Gerhard Mayer
A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects. Briefings Bioinform. 20(4): 1215-1221 (2019) - [j19]Gerhard Rambold, Pelin Yilmaz
Meta-omics data and collection objects (MOD-CO): a conceptual schema and data model for processing sample data in meta-omics research. Database J. Biol. Databases Curation 2019: baz002 (2019) - [j18]Emiliano Pereira-Flores
Fast and accurate average genome size and 16S rRNA gene average copy number computation in metagenomic data. BMC Bioinform. 20(1): 453:1-453:13 (2019) - [j17]R. Henrik Nilsson
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications. Nucleic Acids Res. 47(Database-Issue): D259-D264 (2019) - [i1]Daniel Wibberg
The de.NBI / ELIXIR-DE training platform - Bioinformatics training in Germany and across Europe within ELIXIR. F1000Research 8: 1877 (2019) - 2017
- [j16]Alan Beccati, Jan Gerken
SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees. BMC Bioinform. 18(1): 433:1-433:4 (2017) - 2016
- [j15]Michael Richter, Ramon Rosselló-Mora
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison. Bioinform. 32(6): 929-931 (2016) - 2014
- [j14]Pelin Yilmaz
The SILVA and "All-species Living Tree Project (LTP)" taxonomic frameworks. Nucleic Acids Res. 42(Database-Issue): 643-648 (2014) - [c3]Michael Diepenbroek, Frank Oliver Glöckner, Peter Grobe, Anton Güntsch, Robert Huber, Birgitta König-Ries, Ivaylo Kostadinov, Jens Nieschulze, Bernhard Seeger, Robert Tolksdorf, Dagmar Triebel:
Towards an Integrated Biodiversity and Ecological Research Data Management and Archiving Platform: The German Federation for the Curation of Biological Data (GFBio). GI-Jahrestagung 2014: 1711-1721 - 2013
- [j13]Christian Quast
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 41(Database-Issue): 590-596 (2013) - [c2]Heiner Klingenberg, Robin Martinjak, Frank Oliver Glöckner, Rolf Daniel
Dinucleotide distance histograms for fast detection of rRNA in metatranscriptomic sequences. GCB 2013: 80-89 - 2012
- [j12]Hanno Teeling, Frank Oliver Glöckner:
Current opportunities and challenges in microbial metagenome analysis - a bioinformatic perspective. Briefings Bioinform. 13(6): 728-742 (2012) - [j11]Elmar Pruesse
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes. Bioinform. 28(14): 1823-1829 (2012) - [j10]Marcin Radom
Poseidon: An information retrieval and extraction system for metagenomic marine science. Ecol. Informatics 12: 10-15 (2012) - 2010
- [j9]Wolfgang Hankeln, Pier Luigi Buttigieg
MetaBar - a tool for consistent contextual data acquisition and standards compliant submission. BMC Bioinform. 11: 358 (2010) - [j8]Renzo Kottmann, Ivaylo Kostadinov
Megx.net: integrated database resource for marine ecological genomics. Nucleic Acids Res. 38(Database-Issue): 391-395 (2010) - [c1]Wolfgang Hankeln, Pier Luigi Buttigieg
Applying graph theoretic approaches to microbial metagenomes: ecological perspectives on function. BCB 2010: 478-480
2000 – 2009
- 2008
- [j7]Uta Bohnebeck, Thierry Lombardot
MetaMine - A tool to detect and analyse gene patterns in their environmental context. BMC Bioinform. 9 (2008) - [j6]Michael Richter, Thierry Lombardot
JCoast - A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes. BMC Bioinform. 9 (2008) - 2007
- [j5]Thierry Lombardot
MetaLook: a 3D visualisation software for marine ecological genomics. BMC Bioinform. 8 (2007) - 2006
- [j4]Hanno Teeling, Frank Oliver Glöckner:
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits. BMC Bioinform. 7: 66 (2006) - [j3]Thierry Lombardot
Megx.net - database resources for marine ecological genomics. Nucleic Acids Res. 34(Database-Issue): 390-393 (2006) - 2005
- [j2]Yadhu Kumar, Ralf Westram
Graphical representation of ribosomal RNA probe accessibility data using ARB software package. BMC Bioinform. 6: 61 (2005) - 2004
- [j1]Hanno Teeling, Jost Waldmann, Thierry Lombardot
TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences. BMC Bioinform. 5: 163 (2004)
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