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Jeroen de Ridder
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- affiliation: Delft University of Technology, Delft Bioinformatics Lab, The Netherlands
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2010 – 2019
- 2019
- [j15]Amin Allahyar
, Joske Ubels
A data-driven interactome of synergistic genes improves network-based cancer outcome prediction. PLoS Comput. Biol. 15(2) (2019) - [i1]David Laehnemann
12 Grand Challenges in Single-Cell Data Science. PeerJ Prepr. 7: e27885 (2019) - 2018
- [c4]Arnold Kuzniar, Jason Maassen
A Portable and Scalable Workflow for Detecting Structural Variants in Whole-Genome Sequencing Data. eScience 2018: 303-304 - 2016
- [j14]Jaap Heringa, Marcel J. T. Reinders, Sanne Abeln
ECCB 2016: The 15th European Conference on Computational Biology. Bioinform. 32(17): 389-392 (2016) - 2015
- [j13]Amin Allahyar
FERAL: network-based classifier with application to breast cancer outcome prediction. Bioinform. 31(12): 311-319 (2015) - [j12]Erdogan Taskesen
Integration of gene expression and DNA-methylation profiles improves molecular subtype classification in acute myeloid leukemia. BMC Bioinform. 16(S-4): S5 (2015) - [j11]Sepideh Babaei, Ahmed Mahfouz
Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex. PLoS Comput. Biol. 11(5) (2015) - 2014
- [j10]Marc Hulsman, Christos Dimitrakopoulos, Jeroen de Ridder:
Scale-space measures for graph topology link protein network architecture to function. Bioinform. 30(12): 237-245 (2014) - [j9]Jeroen de Ridder
Soft Skills: An Important Asset Acquired from Organizing Regional Student Group Activities. PLoS Comput. Biol. 10(7) (2014) - 2013
- [j8]Dick de Ridder, Jeroen de Ridder
Pattern recognition in bioinformatics. Briefings Bioinform. 14(5): 633-647 (2013) - [j7]Sepideh Babaei, Marc Hulsman, Marcel J. T. Reinders, Jeroen de Ridder
Detecting recurrent gene mutation in interaction network context using multi-scale graph diffusion. BMC Bioinform. 14: 29 (2013) - [j6]Jeroen de Ridder
Don't Wear Your New Shoes (Yet): Taking the Right Steps to Become a Successful Principal Investigator. PLoS Comput. Biol. 9(1) (2013) - [j5]Jeroen de Ridder
The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013. PLoS Comput. Biol. 9(11) (2013) - [c3]Jeroen de Ridder
Mutational Genomics for Cancer Pathway Discovery. PRIB 2013: 35-46 - 2011
- [b1]Jeroen de Ridder:
Computational approaches for dissecting cancer pathways from insertional mutagenesis data. Delft University of Technology, Netherlands, 2011 - [c2]Sepideh Babaei, Erik van den Akker, Jeroen de Ridder
Integrating Protein Family Sequence Similarities with Gene Expression to Find Signature Gene Networks in Breast Cancer Metastasis. PRIB 2011: 247-259 - 2010
- [j4]Jeroen de Ridder, Alice Gerrits, Jan Bot, Gerald de Haan
Inferring combinatorial association logic networks in multimodal genome-wide screens. Bioinform. 26(12): 149-157 (2010) - [j3]Erdogan Taskesen
HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data. BMC Bioinform. 11: 275 (2010)
2000 – 2009
- 2009
- [j2]Thomas Abeel, Jeroen de Ridder, Lucia Peixoto:
Highlights from the 5th International Society for Computational Biology Student Council Symposium at the 17th Annual International Conference on Intelligent Systems for Molecular Biology and the 8th European Conference on Computational Biology. BMC Bioinform. 10(S-13): 0 (2009) - 2007
- [c1]Jeroen de Ridder, Jaap Kool, Anthony Uren
Co-occurrence analysis of insertional mutagenesis data reveals cooperating oncogenes. ISMB/ECCB (Supplement of Bioinformatics) 2007: 133-141 - 2006
- [j1]Jeroen de Ridder
Detecting Statistically Significant Common Insertion Sites in Retroviral Insertional Mutagenesis Screens. PLoS Comput. Biol. 2(12) (2006)
Coauthor Index
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