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Alfredo Pulvirenti
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2020 – today
- 2024
- [j45]Vincenzo Bonnici
, Roberto Grasso, Giovanni Micale, Antonio Di Maria, Dennis Shasha, Alfredo Pulvirenti, Rosalba Giugno:
ArcMatch: high-performance subgraph matching for labeled graphs by exploiting edge domains. Data Min. Knowl. Discov. 38(6): 3868-3921 (2024) - [j44]Alessia D'anna
Mitigating Interobserver Variability in Radiomics with ComBat: A Feasibility Study. J. Imaging 10(11): 270 (2024) - [j43]Luca Gallo
MultiplexSAGE: A Multiplex Embedding Algorithm for Inter-Layer Link Prediction. IEEE Trans. Neural Networks Learn. Syst. 35(10): 14075-14084 (2024) - [c23]Emanuele Martorana
Motif Finding Algorithms: A Performance Comparison. From Computational Logic to Computational Biology 2024: 250-267 - [e1]Domenico Cantone
From Computational Logic to Computational Biology - Essays Dedicated to Alfredo Ferro to Celebrate His Scientific Career. Lecture Notes in Computer Science 14070, Springer 2024, ISBN 978-3-031-55247-2 [contents] - [i7]Marco Bongiovanni, Luca Gallo, Roberto Grasso, Alfredo Pulvirenti:
MPXGAT: An Attention based Deep Learning Model for Multiplex Graphs Embedding. CoRR abs/2403.19246 (2024) - 2023
- [j42]Elisabetta C. Sciacca
DEGGs: an R package with shiny app for the identification of differentially expressed gene-gene interactions in high-throughput sequencing data. Bioinform. 39(4) (2023) - [c22]Giorgio Locicero, Salvatore Alaimo, Alfredo Ferro, Alfredo Pulvirenti:
MASFENON: Multi-Agent Adaptive Simulation Framework for Evolution in Networks of Networks. BIBM 2023: 3714-3720 - 2022
- [j41]Alessandro Muscolino, Antonio Di Maria
NETME: on-the-fly knowledge network construction from biomedical literature. Appl. Netw. Sci. 7(1): 1-24 (2022) - [j40]Grete Francesca Privitera
Virus finding tools: current solutions and limitations. Briefings Bioinform. 23(4) (2022) - [c21]Ilaria Cosentini
COMBO: A Computational Framework to Analyze RNA-seq and Methylation Data Through Heterogeneous Multi-layer Networks. COMPLEX NETWORKS (1) 2022: 251-264 - [i6]Luca Gallo, Vito Latora, Alfredo Pulvirenti:
MultiSAGE: a multiplex embedding algorithm for inter-layer link prediction. CoRR abs/2206.13223 (2022) - 2021
- [j39]Giovanni Micale
TemporalRI: subgraph isomorphism in temporal networks with multiple contacts. Appl. Netw. Sci. 6(1): 55 (2021) - [j38]Alessandro La Ferlita
RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis. BMC Bioinform. 22(1): 298 (2021) - [j37]Roberto Grasso, Giovanni Micale, Alfredo Ferro, Alfredo Pulvirenti:
MODIT: MOtif DIscovery in Temporal Networks. Frontiers Big Data 4 (2021) - [j36]Salvatore Alaimo
PHENSIM: Phenotype Simulator. PLoS Comput. Biol. 17(6) (2021) - 2020
- [j35]Emanuele Martorana
Establish the expected number of induced motifs on unlabeled graphs through analytical models. Appl. Netw. Sci. 5(1): 58 (2020) - [j34]Sebastiano Di Bella
A benchmarking of pipelines for detecting ncRNAs from RNA-Seq data. Briefings Bioinform. 21(6): 1987-1998 (2020) - [c20]Alessandro Muscolino, Antonio Di Maria
NETME: On-the-Fly Knowledge Network Construction from Biomedical Literature. COMPLEX NETWORKS (2) 2020: 386-397 - [c19]Giorgio Locicero, Giovanni Micale
TemporalRI: A Subgraph Isomorphism Algorithm for Temporal Networks. COMPLEX NETWORKS (2) 2020: 675-687 - [i5]Giovanni Micale, Vincenzo Bonnici, Alfredo Ferro, Dennis E. Shasha, Rosalba Giugno, Alfredo Pulvirenti:
MultiRI: Fast Subgraph Matching in Labeled Multigraphs. CoRR abs/2003.11546 (2020)
2010 – 2019
- 2019
- [j33]Alessandro La Ferlita
Identification of tRNA-derived ncRNAs in TCGA and NCI-60 panel cell lines and development of the public database tRFexplorer. Database J. Biol. Databases Curation 2019: baz115 (2019) - [j32]Salvatore Alaimo
TACITuS: transcriptomic data collector, integrator, and selector on big data platform. BMC Bioinform. 20-S(9): 366:1-366:11 (2019) - [j31]Giovanni Micale
Fast methods for finding significant motifs on labelled multi-relational networks. J. Complex Networks 7(6): 817-837 (2019) - [c18]Emanuele Martorana
Establish the Expected Number of Injective Motifs on Unlabeled Graphs Through Analytical Models. COMPLEX NETWORKS (2) 2019: 255-267 - [i4]Alessandro Pluchino, Giulio Burgio, Andrea Rapisarda, Alessio Emanuele Biondo, Alfredo Pulvirenti, Alfredo Ferro, Toni Giorgino:
Exploring the Role of Interdisciplinarity in Physics: Success, Talent and Luck. CoRR abs/1901.03607 (2019) - 2018
- [j30]Davide S. Sardina
INBIA: a boosting methodology for proteomic network inference. BMC Bioinform. 19-S(7): 77-88 (2018) - [j29]Giovanni Micale
Fast analytical methods for finding significant labeled graph motifs. Data Min. Knowl. Discov. 32(2): 504-531 (2018) - [j28]Nicola Lettieri
Ex Machina: Analytical platforms, Law and the Challenges of Computational Legal Science. Future Internet 10(5): 37 (2018) - [j27]Francesco Russo
miRandola 2017: a curated knowledge base of non-invasive biomarkers. Nucleic Acids Res. 46(Database-Issue): D354-D359 (2018) - [c17]Antonino Aparo
Simple Pattern-only Heuristics Lead to Fast Subgraph Matching Strategies on Very Large Networks. PACBB 2018: 131-138 - [p3]Misael Mongiovì, Giovanni Micale, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti, Dennis E. Shasha:
gLabTrie: A Data Structure for Motif Discovery with Constraints. Graph Data Management 2018: 71-95 - 2017
- [j26]Davide S. Sardina
A novel computational method for inferring competing endogenous interactions. Briefings Bioinform. 18(6): 1071-1081 (2017) - [c16]Andre Petermann, Giovanni Micale
Mining and ranking of generalized multi-dimensional frequent subgraphs. ICDIM 2017: 236-245 - 2016
- [j25]Vincenzo Bonnici
APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks. Bioinform. 32(14): 2159-2166 (2016) - [j24]Angelo Nuzzo, Giovanni Carapezza, Sebastiano Di Bella
KAOS: a new automated computational method for the identification of overexpressed genes. BMC Bioinform. 17(S-12): 5-14 (2016) - 2015
- [j23]Anna P. Privitera
OCDB: a database collecting genes, miRNAs and drugs for obsessive-compulsive disorder. Database J. Biol. Databases Curation 2015 (2015) - [j22]Salvatore Alaimo
DT-Web: a web-based application for drug-target interaction and drug combination prediction through domain-tuned network-based inference. BMC Syst. Biol. 9(S-3): S4 (2015) - [j21]Alfredo Pulvirenti, Rosalba Giugno
A knowledge base for Vitis vinifera functional analysis. BMC Syst. Biol. 9(S-3): S5 (2015) - [i3]Salvatore Alaimo, Rosalba Giugno, Mario Acunzo, Dario Veneziano, Alfredo Ferro, Alfredo Pulvirenti:
Post-transcriptional knowledge in pathway analysis increases the accuracy of phenotypes classification. CoRR abs/1510.08237 (2015) - [i2]Fabio Rinnone
NetMatchStar: an enhanced Cytoscape network querying app. F1000Research 4: 479 (2015) - 2014
- [i1]Giovanni Micale
GASOLINE: a Cytoscape app for multiple local alignment of PPI networks. F1000Research 3: 140 (2014) - 2013
- [j20]Salvatore Alaimo
Drug-target interaction prediction through domain-tuned network-based inference. Bioinform. 29(16): 2004-2008 (2013) - [j19]Carmela Gissi
Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics. BMC Bioinform. 14(S-7): S1 (2013) - [j18]Vincenzo Bonnici
A subgraph isomorphism algorithm and its application to biochemical data. BMC Bioinform. 14(S-7): S13 (2013) - [j17]Rosario Distefano, Giovanni Nigita
VIRGO: visualization of A-to-I RNA editing sites in genomic sequences. BMC Bioinform. 14(S-7): S5 (2013) - [j16]Carmelo Cassisi
Enhancing density-based clustering: Parameter reduction and outlier detection. Inf. Syst. 38(3): 317-330 (2013) - 2012
- [j15]Alessandro Laganà, Alessio Paone
miR-EdiTar: a database of predicted A-to-I edited miRNA target sites. Bioinform. 28(23): 3166-3168 (2012) - 2011
- [j14]S. Cristaldi, Alfredo Ferro, Rosalba Giugno
Obstacles constrained group mobility models in event-driven wireless networks with movable base stations. Ad Hoc Networks 9(3): 400-417 (2011) - [j13]Paolo Romano
Editorial. Briefings Bioinform. 12(6): 547-548 (2011) - [j12]Paolo Romano
Tools and collaborative environments for bioinformatics research. Briefings Bioinform. 12(6): 549-561 (2011) - [c15]Marco Aliotta, Andrea Cannata
DBStrata: a system for density-based clustering and outlier detection based on stratification. SISAP 2011: 107-108 - [p2]Alfredo Ferro, Rosalba Giugno
Behind Efficient Algorithms to Search in Graphs. Graph Data Management 2011: 89-111 - 2010
- [j11]Raffaele Di Natale
SING: Subgraph search In Non-homogeneous Graphs. BMC Bioinform. 11: 96 (2010) - [j10]Misael Mongiovì
Sigma: a Set-Cover-Based Inexact Graph Matching Algorithm. J. Bioinform. Comput. Biol. 8(2): 199-218 (2010) - [c14]Alfredo Ferro, Rosalba Giugno
An Efficient Duplicate Record Detection Using q-Grams Array Inverted Index. DaWak 2010: 309-323 - [c13]Alfredo Ferro, Rosalba Giugno
MySQL Data Mining: Extending MySQL to Support Data Mining Primitives (Demo). KES (3) 2010: 438-444 - [c12]Vincenzo Bonnici
Enhancing Graph Database Indexing by Suffix Tree Structure. PRIB 2010: 195-203
2000 – 2009
- 2009
- [j9]Alessandro Laganà, Stefano Forte
miRò: a miRNA knowledge base. Database J. Biol. Databases Curation 2009 (2009) - [c11]Alfredo Ferro, Rosalba Giugno
BitCube: A Bottom-Up Cubing Engineering. DaWaK 2009: 189-203 - [c10]Alfredo Ferro, Rosalba Giugno
Distributed randomized algorithms for low-support data mining. IPDPS 2009: 1-7 - 2008
- [j8]Alfredo Ferro, Rosalba Giugno
GraphFind: enhancing graph searching by low support data mining techniques. BMC Bioinform. 9(S-4) (2008) - 2007
- [j7]Alfredo Ferro, Rosalba Giugno
NetMatch: a Cytoscape plugin for searching biological networks. Bioinform. 23(7): 910-912 (2007) - [j6]Alfredo Ferro, Rosalba Giugno
Sequence similarity is more relevant than species specificity in probabilistic backtranslation. BMC Bioinform. 8 (2007) - 2006
- [c9]Alfredo Ferro, Rosalba Giugno
Distributed antipole clustering for efficient data search and management in Euclidean and metric spaces. IPDPS 2006 - 2005
- [j5]Domenico Cantone
An Efficient Approximate Algorithm for the 1-Median Problem in Metric Spaces. SIAM J. Optim. 16(2): 434-451 (2005) - [j4]Domenico Cantone
Antipole Tree Indexing to Support Range Search and K-Nearest Neighbor Search in Metric Spaces. IEEE Trans. Knowl. Data Eng. 17(4): 535-550 (2005) - [c8]Rosalba Giugno, Alfredo Pulvirenti, Diego Reforgiato Recupero:
Clustered Trie Structures for Approximate Search in Hierarchical Objects Collections. ICAPR (1) 2005: 63-70 - [c7]Domenico Cantone, Alfredo Ferro, Rosalba Giugno
Multiple-Winners Randomized Tournaments with Consensus for Optimization Problems in Generic Metric Spaces. WEA 2005: 265-276 - [p1]Cinzia Di Pietro, Alfredo Ferro, Giuseppe Pigola, Alfredo Pulvirenti, Michele Purrello, Marco Ragusa, Dennis E. Shasha:
AntiClustAl: Multiple Sequence Alignment by Antipole Clustering. Data Mining in Bioinformatics 2005: 43-57 - 2004
- [c6]Rosalba Giugno, Alfredo Pulvirenti, Marco Ragusa
Locally sensitive backtranslation based on multiple sequence alignment. CIBCB 2004: 231-237 - 2003
- [b1]Alfredo Pulvirenti:
Data structures and algorithms for optimization problems and advanced search in high-dimension metric spaces. University of Catania, Italy, 2003 - [j3]A. Andronico, Roberto Barbera
GENIUS: a simple and easy way to access computational and data grids. Future Gener. Comput. Syst. 19(6): 805-813 (2003) - [j2]Alfredo Ferro, Giuseppe Pigola, Alfredo Pulvirenti, Dennis E. Shasha:
Fast Clustering and Minimum Weight Matching Algorithms for Very Large Mobile Backbone Wireless Networks. Int. J. Found. Comput. Sci. 14(2): 223-236 (2003) - [c5]Alfredo Ferro, Rosalba Giugno
Efficient Boundary Values Generation in General Metric Spaces for Software Component Testing. Verification: Theory and Practice 2003: 318-331 - [c4]Cinzia Di Pietro, Valentina Di Pietro, Giovanni Emmanuele, Alfredo Ferro, T. Maugeri, E. Modica, Giuseppe Pigola, Alfredo Pulvirenti, Michele Purrello, Marco Ragusa, Marina Scalia, Dennis E. Shasha, Salvo Travali, V. Zimmitti:
ANTICLUSTAL: Multiple Sequence Alignment by Antipole Clustering and Linear Approximate 1-Median Computation. CSB 2003: 326-336 - [c3]Giuseppe Andronico, Roberto Barbera
The GENIUS web portal: grid computing made easy. ITCC 2003: 425-431 - [c2]Sebastiano Battiato, Alfredo Pulvirenti, Diego Reforgiato Recupero:
Antipole Clustering for Fast Texture Synthesis. WSCG 2003 - 2001
- [j1]Alfredo Ferro, Giovanni Gallo
Best-Match Retrieval for Structured Images. IEEE Trans. Pattern Anal. Mach. Intell. 23(7): 707-718 (2001) - [c1]Giovanni Gallo
Remote Sensed Images Segmentation through Shape Refinement. ICIAP 2001: 137-144
Coauthor Index
[j42] [c22] [j41] [j40] [c21] [j39] [j38] [j37] [j36] [j35] [j34] [c20] [c19] [i5] [j33] [j32] [j31] [c18] [i4] [j30] [j29] [j27] [c17] [p3] [j26] [j23] [j22] [j21] [i3] [i2] [i1] [j20] [j19] [j18] [j17] [j16] [j15] [j14] [p2] [j11] [j10] [c14] [c13] [c12] [j9] [c11] [c10] [j8] [j7] [j6] [c9] [j5] [j4] [c7] [p1] [c6] [j2] [c5] [c4] [j1]
Dennis E. Shasha
aka: Dennis Shasha
aka: Dennis Shasha
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last updated on 2024-12-10 21:45 CET by the dblp team
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