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Nathan D. Price 0001
Person information
- affiliation: Institute for Systems Biology, Seattle, WA, USA
- affiliation: University of Illinois, Department of Chemical and Biomolecular Engineering, Urbana, IL, USA
- affiliation (PhD 2005): University of California San Diego, Department of Bioengineering, San Diego, CA, USA
Other persons with the same name
- Nathan D. Price 0002
— Missouri University of Science and Technology, Department of Electrical and Computer Engineering, Rolla, MO, USA
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2010 – 2019
- 2019
- [j24]Fangzhou Shen, Renliang Sun, Jie Yao, Jian Li, Qian Liu, Nathan D. Price
OptRAM: In-silico strain design via integrative regulatory-metabolic network modeling. PLoS Comput. Biol. 15(3) (2019) - 2018
- [j23]Brendan King, Terry Farrah, Matthew A. Richards, Michael B. Mundy
ProbAnnoWeb and ProbAnnoPy: probabilistic annotation and gap-filling of metabolic reconstructions. Bioinform. 34(9): 1594-1596 (2018) - [i2]Ravi K. Madduri, Kyle Chard, Michel D'Arcy, Segun Jung, Alexis A. Rodriguez, Dinanath Sulakhe, Eric Deutsch, Cory C. Funk, Benjamin D. Heavner, Matthew A. Richards, Paul Shannon, Gustavo Glusman, Nathan D. Price, Carl Kesselman, Ian T. Foster:
Reproducible big data science: A case study in continuous FAIRness. RO 2018 - 2016
- [j22]Joseph Xu Zhou, Areejit Samal
Relative stability of network states in Boolean network models of gene regulation in development. Biosyst. 142-143: 15-24 (2016) - [c2]Kyle Chard, Mike D'Arcy
I'll take that to go: Big data bags and minimal identifiers for exchange of large, complex datasets. IEEE BigData 2016: 319-328 - 2015
- [j21]Arthur W. Toga, Ian T. Foster, Carl Kesselman
Big biomedical data as the key resource for discovery science. J. Am. Medical Informatics Assoc. 22(6): 1126-1131 (2015) - [j20]Benjamin D. Heavner
Comparative Analysis of Yeast Metabolic Network Models Highlights Progress, Opportunities for Metabolic Reconstruction. PLoS Comput. Biol. 11(11) (2015) - [j19]Shuyi Ma
Integrated Modeling of Gene Regulatory and Metabolic Networks in Mycobacterium tuberculosis. PLoS Comput. Biol. 11(11) (2015) - 2014
- [j18]Matthew N. Benedict, Michael B. Mundy
Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models. PLoS Comput. Biol. 10(10) (2014) - 2013
- [j17]Benjamin D. Heavner
Version 6 of the consensus yeast metabolic network refines biochemical coverage and improves model performance. Database J. Biol. Databases Curation 2013 (2013) - [j16]John C. Earls
AUREA: an open-source software system for accurate and user-friendly identification of relative expression molecular signatures. BMC Bioinform. 14: 78 (2013) - [j15]Jaeyun Sung
Multi-study Integration of Brain Cancer Transcriptomes Reveals Organ-Level Molecular Signatures. PLoS Comput. Biol. 9(7) (2013) - [j14]Sriram Chandrasekaran
Metabolic Constraint-Based Refinement of Transcriptional Regulatory Networks. PLoS Comput. Biol. 9(12) (2013) - 2012
- [j13]Gürkan Bebek, Mehmet Koyutürk
Network biology methods integrating biological data for translational science. Briefings Bioinform. 13(4): 446-459 (2012) - [j12]Andrew T. Magis
The top-scoring 'N' algorithm: a generalized relative expression classification method from small numbers of biomolecules. BMC Bioinform. 13: 227 (2012) - [j11]Yuliang Wang
Reconstruction of genome-scale metabolic models for 126 human tissues using mCADRE. BMC Syst. Biol. 6: 153 (2012) - 2011
- [j10]Andrew T. Magis
Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup. Bioinform. 27(6): 872-873 (2011) - [j9]Caroline B. Milne, James A. Eddy, Ravali Raju, Soroush Ardekani, Pan-Jun Kim
Metabolic network reconstruction and genome-scale model of butanol-producing strain Clostridium beijerinckii NCIMB 8052. BMC Syst. Biol. 5: 130 (2011) - [j8]Pan-Jun Kim
Genetic Co-Occurrence Network across Sequenced Microbes. PLoS Comput. Biol. 7(12) (2011) - [c1]Gürkan Bebek, Mehmet Koyutürk, Mark R. Chance, Nathan D. Price:
Session Introduction. Pacific Symposium on Biocomputing 2011: 1-3 - 2010
- [j7]James A. Eddy, Leroy E. Hood, Nathan D. Price
Identifying Tightly Regulated and Variably Expressed Networks by Differential Rank Conservation (DIRAC). PLoS Comput. Biol. 6(5) (2010) - [j6]Olgica Milenkovic, Gil Alterovitz, Gerard Battail, Todd P. Coleman
Introduction to the special issue on information theory in molecular biology and neuroscience. IEEE Trans. Inf. Theory 56(2): 649-652 (2010) - [j5]David J. Galas, Matti Nykter, Gregory W. Carter, Nathan D. Price
Biological information as set-based complexity. IEEE Trans. Inf. Theory 56(2): 667-677 (2010)
2000 – 2009
- 2009
- [r1]James A. Eddy, Nathan D. Price:
Biological Data Integration and Model Building. Encyclopedia of Complexity and Systems Science 2009: 511-524 - 2008
- [i1]David J. Galas, Matti Nykter, Gregory W. Carter, Nathan D. Price, Ilya Shmulevich:
Set-based complexity and biological information. CoRR abs/0801.4024 (2008) - 2006
- [j4]Scott A. Becker, Nathan D. Price
Metabolite coupling in genome-scale metabolic networks. BMC Bioinform. 7: 111 (2006) - [j3]Christian L. Barrett, Nathan D. Price
Network-level analysis of metabolic regulation in the human red blood cell using random sampling and singular value decomposition. BMC Bioinform. 7: 132 (2006) - [j2]Timothy E. Allen, Nathan D. Price
Long-Range Periodic Patterns in Microbial Genomes Indicate Significant Multi-Scale Chromosomal Organization. PLoS Comput. Biol. 2(1) (2006) - [j1]Erwin P. Gianchandani, Jason A. Papin
Matrix Formalism to Describe Functional States of Transcriptional Regulatory Systems. PLoS Comput. Biol. 2(8) (2006)
Coauthor Index
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