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Anil G. Jegga
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2020 – today
- 2022
- [j23]Jaswanth K. Yella
, Anil G. Jegga
MGATRx: Discovering Drug Repositioning Candidates Using Multi-View Graph Attention. IEEE ACM Trans. Comput. Biol. Bioinform. 19(5): 2596-2604 (2022) - [c7]Jaswanth K. Yella, Sudhir Ghandikota, Anil G. Jegga:
GraMDTA: Multimodal Graph Neural Networks for Predicting Drug-Target Associations. BIBM 2022: 1957-1965 - [c6]Sudhir Ghandikota, Jaswanth K. Yella, Anil G. Jegga:
Multimodal feature learning framework for disease biomarker discovery. BIBM 2022: 3252-3259 - 2021
- [j22]Sudhir Ghandikota
Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19. Patterns 2(5): 100247 (2021) - 2020
- [c5]Sudhir Ghandikota, Anil G. Jegga:
A multi-context feature learning approach to identify disease-specific gene neighborhoods. BCB 2020: 25:1-25:6 - [c4]Yizong Cheng, Jaswanth K. Yella, Anil G. Jegga
Triangle-Based Tripartite Graph Clustering. BIBM 2020: 1769-1776
2010 – 2019
- 2014
- [j21]Chao Wu, Eric E. Bardes, Anil G. Jegga
ToppMiR: ranking microRNAs and their mRNA targets based on biological functions and context. Nucleic Acids Res. 42(Webserver-Issue): 107-113 (2014) - 2013
- [j20]Kazuhiko Bessho, Kumar Shanmukhappa, Rachel Sheridan
Integrative genomics identifies candidate microRNAs for pathogenesis of experimental biliary atresia. BMC Syst. Biol. 7: 104 (2013) - [j19]Chao Wu, Ranga Chandra Gudivada, Bruce J. Aronow, Anil G. Jegga
Computational drug repositioning through heterogeneous network clustering. BMC Syst. Biol. 7(S-5): S6 (2013) - [j18]Louise Deléger
Large-scale evaluation of automated clinical note de-identification and its impact on information extraction. J. Am. Medical Informatics Assoc. 20(1): 84-94 (2013) - [j17]Qi Li, Louise Deléger
Mining FDA drug labels for medical conditions. BMC Medical Informatics Decis. Mak. 13: 53 (2013) - [c3]Chao Wu, Arjun Bakshi, Bruce J. Aronow, Anil G. Jegga
A Biclustering Algorithm to Discover Functional Modules from ENCODE ChIP-Seq Data. ICDM Workshops 2013: 96-103 - 2012
- [j16]Cheng Zhu, Akash Kushwaha, Kenneth Berman, Anil G. Jegga
A vertex similarity-based framework to discover and rank orphan disease-related genes. BMC Syst. Biol. 6(S-3): S8 (2012) - 2011
- [j15]Divya Sardana, Cheng Zhu, Minlu Zhang, Ranga Chandra Gudivada, Lun Yang, Anil G. Jegga
Drug repositioning for orphan diseases. Briefings Bioinform. 12(4): 346-356 (2011) - [j14]Lun Yang, Kejian Wang, Jian Chen, Anil G. Jegga
Exploring Off-Targets and Off-Systems for Adverse Drug Reactions via Chemical-Protein Interactome - Clozapine-Induced Agranulocytosis as a Case Study. PLoS Comput. Biol. 7(3) (2011) - 2010
- [j13]Vivek Kaimal, Eric E. Bardes
ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems. Nucleic Acids Res. 38(Web-Server-Issue): 96-102 (2010) - [j12]Divya Sardana, Suresh Vasa, Nishanth Vepachedu, Jing Chen
PhenoHM: human-mouse comparative phenome-genome server. Nucleic Acids Res. 38(Web-Server-Issue): 165-174 (2010) - [j11]Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
A novel framework for detecting maximally banded matrices in binary data. Stat. Anal. Data Min. 3(6): 431-445 (2010) - [c2]Faris Alqadah, Raj Bhatnagar, Anil G. Jegga
Mining Maximally Banded Matrices in Binary Data. SDM 2010: 942-953
2000 – 2009
- 2009
- [j10]Jing Chen
Disease candidate gene identification and prioritization using protein interaction networks. BMC Bioinform. 10 (2009) - [j9]Jing Chen
Correction: Disease candidate gene identification and prioritization using protein interaction networks. BMC Bioinform. 10: 406 (2009) - [j8]Sivakumar Gowrisankar, Anil G. Jegga
Regression based predictor for p53 transactivation. BMC Bioinform. 10 (2009) - [j7]Xiaoyan A. Qu, Ranga Chandra Gudivada, Anil G. Jegga
Inferring novel disease indications for known drugs by semantically linking drug action and disease mechanism relationships. BMC Bioinform. 10(S-5) (2009) - [j6]Jing Chen
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization. Nucleic Acids Res. 37(Web-Server-Issue): 305-311 (2009) - 2008
- [j5]Ranga Chandra Gudivada, Xiaoyan A. Qu, Jing Chen
Identifying disease-causal genes using Semantic Web-based representation of integrated genomic and phenomic knowledge. J. Biomed. Informatics 41(5): 717-729 (2008) - 2007
- [j4]Jing Chen
Improved human disease candidate gene prioritization using mouse phenotype. BMC Bioinform. 8 (2007) - [j3]Anil G. Jegga
GenomeTrafac: a whole genome resource for the detection of transcription factor binding site clusters associated with conventional and microRNA encoding genes conserved between mouse and human gene orthologs. Nucleic Acids Res. 35(Database-Issue): 116-121 (2007) - [j2]Anil G. Jegga
PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease. Nucleic Acids Res. 35(Database-Issue): 700-706 (2007) - [c1]Amit U. Sinha, Mukta Phatak, Raj Bhatnagar, Anil G. Jegga
Identifying Functional Binding Motifs of Tumor Protein p53 Using Support Vector Machines. ICMLA 2007: 506-511 - 2005
- [j1]Anil G. Jegga
CisMols Analyzer: identification of compositionally similar cis-element clusters in ortholog conserved regions of coordinately expressed genes. Nucleic Acids Res. 33(Web-Server-Issue): 408-411 (2005)
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