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Paulo Vilaça
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2010 – 2019
- 2018
- [j8]Bruno Pereira, Joana Miguel, Paulo Vilaça
, Simão Soares, Isabel Rocha
Reconstruction of a genome-scale metabolic model for Actinobacillus succinogenes 130Z. BMC Syst. Biol. 12(1): 61:1-61:12 (2018) - [c8]Cláudia M. Bauer, Paulo Vilaça
In Silico Predictions for Fucoxanthin Production by the Diatom Phaeodactylum Tricornutum. PACBB 2018: 139-148 - 2017
- [j7]Oscar Días
Genome-Wide Semi-Automated Annotation of Transporter Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 14(2): 443-456 (2017) - [c7]Nuno Osório, Paulo Vilaça
A Critical Evaluation of Automatic Atom Mapping Algorithms and Tools. PACBB 2017: 257-264 - 2015
- [j6]Filipe Liu
Development and application of efficient pathway enumeration algorithms for metabolic engineering applications. Comput. Methods Programs Biomed. 118(2): 134-146 (2015) - 2014
- [j5]Alberto Noronha
An integrated network visualization framework towards metabolic engineering applications. BMC Bioinform. 15: 6594 (2014) - [j4]Rafael Carreira, Pedro Evangelista, Paulo Maia, Paulo Vilaça, Marcellinus Pont, Jean-François Tomb, Isabel Rocha, Miguel Rocha:
CBFA: phenotype prediction integrating metabolic models with constraints derived from experimental data. BMC Syst. Biol. 8: 123 (2014) - [c6]Orlando Rocha, Paulo Vilaça
Reg4OptFlux: an OptFlux plug-in that comprises meta-heuristics approaches for Metabolic engineering using integrated models. NaBIC 2014: 226-231 - [c5]Filipe Liu
Evaluating Pathway Enumeration Algorithms in Metabolic Engineering Case Studies. PACBB 2014: 215-223 - 2013
- [c4]Alberto Noronha, Paulo Vilaça
Network Visualization Tools to Enhance Metabolic Engineering Platforms. PACBB 2013: 137-144 - 2012
- [j3]Paulo Maia, Paulo Vilaça, Isabel Rocha, Marcellinus Pont, Jean-François Tomb, Miguel Rocha:
An integrated computational environment for elementary modes analysis of biochemical networks. Int. J. Data Min. Bioinform. 6(4): 382-395 (2012) - [c3]João G. R. Cardoso
An Algorithm to Assemble Gene-Protein-Reaction Associations for Genome-Scale Metabolic Model Reconstruction. PRIB 2012: 118-128 - 2011
- [j2]Paulo Vilaça
A computational tool for the simulation and optimization of microbial strains accounting integrated metabolic/regulatory information. Biosyst. 103(3): 435-441 (2011) - [c2]Paulo Vilaça, Paulo Maia, Miguel Rocha
A Study on the Robustness of Strain Optimization Algorithms. PACBB 2011: 329-336 - 2010
- [j1]Isabel Rocha, Paulo Maia, Pedro Evangelista, Paulo Vilaça, Simão Soares, José P. Pinto, Jens Nielsen, Kiran Raosaheb Patil, Eugénio C. Ferreira, Miguel Rocha:
OptFlux: an open-source software platform for in silico metabolic engineering. BMC Syst. Biol. 4: 45 (2010) - [c1]Paulo Vilaça, Paulo Maia, Isabel Rocha, Miguel Rocha:
Metaheuristics for Strain Optimization Using Transcriptional Information Enriched Metabolic Models. EvoBIO 2010: 205-216
Coauthor Index
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