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Yun William Yu
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2020 – today
- 2024
- [j13]Andrew Zheng, Jim Shaw, Yun William Yu:
Mora: abundance aware metagenomic read re-assignment for disentangling similar strains. BMC Bioinform. 25(1): 161 (2024) - [j12]Yun William Yu:
On Minimizers and Convolutional Filters: Theoretical Connections and Applications to Genome Analysis. J. Comput. Biol. 31(5): 381-395 (2024) - [c5]Alexander T. Leighton, Yun William Yu:
Secure Federated Boolean Count Queries Using Fully-Homomorphic Cryptography. RECOMB 2024: 54-67 - 2023
- [j11]Luke Staniscia, Yun William Yu:
Image-centric compression of protein structures improves space savings. BMC Bioinform. 24(1): 437 (2023) - [c4]Yun William Yu, Griffin M. Weber:
HyperMinHash: MinHash in LogLog Space (Extended Abstract). ICDE 2023: 3881-3882 - [c3]Daphne Ippolito, Nicholas Carlini, Katherine Lee, Milad Nasr, Yun William Yu:
Reverse-Engineering Decoding Strategies Given Blackbox Access to a Language Generation System. INLG 2023: 396-406 - [i9]Daphne Ippolito, Nicholas Carlini, Katherine Lee, Milad Nasr, Yun William Yu:
Reverse-Engineering Decoding Strategies Given Blackbox Access to a Language Generation System. CoRR abs/2309.04858 (2023) - 2022
- [j10]Jim Shaw, Yun William Yu:
Theory of local k-mer selection with applications to long-read alignment. Bioinform. 38(20): 4659-4669 (2022) - [j9]Jim Shaw, Yun William Yu:
flopp: Extremely Fast Long-Read Polyploid Haplotype Phasing by Uniform Tree Partitioning. J. Comput. Biol. 29(2): 195-211 (2022) - [j8]Yun William Yu, Griffin M. Weber:
HyperMinHash: MinHash in LogLog Space. IEEE Trans. Knowl. Data Eng. 34(1): 328-339 (2022) - [c2]James Koppel, Yun William Yu:
Skiing Is Easy, Gymnastics Is Hard: Complexity of Routine Construction in Olympic Sports. FUN 2022: 17:1-17:20 - 2021
- [j7]Ziye Tao, Griffin M. Weber, Yun William Yu:
Expected 10-anonymity of HyperLogLog sketches for federated queries of clinical data repositories. Bioinform. 37(Supplement): 151-160 (2021) - [j6]Yoshua Bengio, Daphne Ippolito, Richard Janda, Max Jarvie, Benjamin Prud'homme, Jean-Franois Rousseau, Abhinav Sharma, Yun William Yu:
Inherent privacy limitations of decentralized contact tracing apps. J. Am. Medical Informatics Assoc. 28(1): 193-195 (2021) - [j5]Bonnie Berger, Michael S. Waterman, Yun William Yu:
Levenshtein Distance, Sequence Comparison and Biological Database Search. IEEE Trans. Inf. Theory 67(6): 3287-3294 (2021) - [i8]Yun William Yu:
On minimizers and convolutional filters: a partial justification for the unreasonable effectiveness of CNNs in categorical sequence analysis. CoRR abs/2111.08452 (2021) - 2020
- [i7]Hyunghoon Cho, Daphne Ippolito, Yun William Yu:
Contact Tracing Mobile Apps for COVID-19: Privacy Considerations and Related Trade-offs. CoRR abs/2003.11511 (2020) - [i6]Hannah Alsdurf, Yoshua Bengio, Tristan Deleu, Prateek Gupta, Daphne Ippolito, Richard Janda, Max Jarvie, Tyler Kolody, Sekoul Krastev, Tegan Maharaj, Robert Obryk, Dan Pilat, Valerie Pisano, Benjamin Prud'homme, Meng Qu, Nasim Rahaman, Irina Rish, Jean-Franois Rousseau, Abhinav Sharma, Brooke Struck, Jian Tang, Martin Weiss, Yun William Yu:
COVI White Paper. CoRR abs/2005.08502 (2020) - [i5]Yun William Yu, Jean-Charles Delvenne, Sophia N. Yaliraki, Mauricio Barahona:
Severability of mesoscale components and local time scales in dynamical networks. CoRR abs/2006.02972 (2020) - [i4]Abbas Hammoud, Yun William Yu:
Privacy-accuracy trade-offs in noisy digital exposure notifications. CoRR abs/2011.03995 (2020)
2010 – 2019
- 2019
- [j4]Yunan Luo, Yun William Yu, Jianyang Zeng, Bonnie Berger, Jian Peng:
Metagenomic binning through low-density hashing. Bioinform. 35(2): 219-226 (2019) - 2018
- [j3]Yaron Orenstein, Yun William Yu, Bonnie Berger:
Joker de Bruijn: Covering k-Mers Using Joker Characters. J. Comput. Biol. 25(11): 1171-1178 (2018) - 2017
- [j2]Erik D. Demaine, Martin L. Demaine, Sarah Eisenstat, Adam Hesterberg, Andrea Lincoln, Jayson Lynch, Yun William Yu:
Total Tetris: Tetris with Monominoes, Dominoes, Trominoes, Pentominoes, ... J. Inf. Process. 25: 515-527 (2017) - [i3]Yun William Yu, Griffin M. Weber:
HyperMinHash: Jaccard index sketching in LogLog space. CoRR abs/1710.08436 (2017) - 2016
- [j1]Ariya Shajii, Deniz Yörükoglu, Yun William Yu, Bonnie Berger:
Fast genotyping of known SNPs through approximate k-mer matching. Bioinform. 32(17): 538-544 (2016) - [i2]Yun William Yu:
Approximation hardness of Shortest Common Superstring variants. CoRR abs/1602.08648 (2016) - 2015
- [i1]Yun William Yu, Noah M. Daniels, David Christian Danko, Bonnie Berger:
Entropy-scaling search of massive biological data. CoRR abs/1503.05638 (2015) - 2014
- [c1]Yun William Yu, Deniz Yörükoglu, Bonnie Berger:
Traversing the k-mer Landscape of NGS Read Datasets for Quality Score Sparsification. RECOMB 2014: 385-399
Coauthor Index
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last updated on 2024-10-07 22:15 CEST by the dblp team
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