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Etienne Z. Gnimpieba
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2020 – today
- 2024
- [i3]Sandeep Chataut, Tuyen Do, Bichar Dip Shrestha Gurung, Shiva Aryal, Anup Khanal, Carol Lushbough, Etienne Z. Gnimpieba
:
Comparative Study of Domain Driven Terms Extraction Using Large Language Models. CoRR abs/2404.02330 (2024) - [i2]Shiva Aryal, Tuyen Do, Bisesh Heyojoo, Sandeep Chataut, Bichar Dip Shrestha Gurung, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba
Leveraging Multi-AI Agents for Cross-Domain Knowledge Discovery. CoRR abs/2404.08511 (2024) - 2023
- [j4]Alain Bertrand Bomgni
ESPINA: efficient and secured protocol for emerging IoT network applications. Clust. Comput. 26(1): 85-98 (2023) - [j3]Yann Brice Chebu Mtopi, Alain Bertrand Bomgni
MultiHop optimal time complexity clustering for emerging IoT applications. Clust. Comput. 26(2): 993-1009 (2023) - [c24]Alain Bertrand Bomgni, Dialo Abdala, Bichar Dip Shrestha Gurung
Fine-tuning a pre-trained Transformers-based model for gene name entity recognition in biomedical text using a customized dataset: case of Desulfovibrio vulgaris Hildenborough. BIBM 2023: 4473-4479 - [c23]Alain Bertrand Bomgni, Claude Epiphanie Mbotchack Ngale, Shiva Aryal, Marcellin Julius Antonio Nkenlifack, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba
NLPADADE: Leveraging Natural Language Processing for Automated Detection of Adverse Drug Effects. BIBM 2023: 4480-4487 - [c22]Ramesh Devadig, Bichar Dip Shrestha Gurung
Computational methods for biofouling and corrosion-resistant graphene nanocomposites. A transdisciplinary approach. BIBM 2023: 4494-4496 - [c21]Tuyen Do
Utilizing XGBoost for the Prediction of Material Corrosion Rates from Embedded Tabular Data using Large Language Model. BIBM 2023: 4497-4499 - [c20]Bichar Dip Shrestha Gurung
Transformer in Microbial Image Analysis: A Comparative Exploration of TransUNet, UNet, and DoubleUNet for SEM Image Segmentation. BIBM 2023: 4500-4502 - [c19]Sam Haas, Bichar Dip Shrestha Gurung
SIMPL - An Application for Cell and Microbe Tracking Using Machine Learning. BIBM 2023: 4503-4505 - [c18]Ram Nageena Singh, Etienne Z. Gnimpieba
Genome wide computational prediction and analysis of noncoding genome of corrosive biofilm forming Oleidesulfovibrio alaskensis G20. BIBM 2023: 4509-4512 - 2022
- [c17]Alain Bertrand Bomgni, Ernest Basile Fotseu Fotseu, Daril Raoul Kengne Wambo, Rajesh Kumar Sani, Carol Lushbough, Etienne Z. Gnimpieba
Attention model-based and multi-organism driven gene recognition from text: application to a microbial biofilm organism set. BIBM 2022: 3596-3598 - [c16]Bichar Dip Shrestha Gurung
U-Net Based Image Segmentation Techniques for Development of Non-Biocidal Fouling-Resistant Ultra-Thin Two-dimensional (2D) Coatings. BIBM 2022: 3602-3604 - [c15]Sam Haas, Timothy W. Hartman
Using BASIN-ML for Machine Learning-Based Statistical Analysis and Reporting for Biofilm Datasets. BIBM 2022: 3605-3607 - [c14]Ram Nageena Singh
Title: Challenges in single cells sequencing Microbial community and biofilm: A case of Oleidesulfovibrio alaskensis G20 NGS protocol. BIBM 2022: 3613-3615 - 2021
- [c13]Ernest Basile Fotseu Fotseu, Thierry Kongne Nembot, Rajesh Kumar Sani, Venkataramana Gadhamshetty, Etienne Z. Gnimpieba
GenNER - A highly scalable and optimal NER method for text-based gene and protein recognition. BIBM 2021: 3562-3569 - [c12]William Gasper, Jiahao Ma, Dario Ghersi, Etienne Z. Gnimpieba
Automatic Extension of Medical Subject Headings (MeSH) Thesaurus to Emerging Research. BIBM 2021: 3570-3577 - [c11]Thierry Kongne Nembot, Ernest Basile Fotseu Fotseu, Rajesh Kumar Sani, Etienne Z. Gnimpieba
Prediction of essential genes in G20 using machine learning model. BIBM 2021: 3578-3582 - [c10]Priya Saxena, Abhilash Kumar Tripathi, Payal Thakur, Shailabh Rauniyar
Integration of text mining and biological network analysis to access essential genes in Desulfovibrio alaskensis G20. BIBM 2021: 3583-3585 - [c9]Payal Thakur, Shailabh Rauniyar
Identifying genes involved in biocorrosion from the literature using text-mining. BIBM 2021: 3586-3588 - [c8]Abhilash Kumar Tripathi, Priya Saxena, Payal Thakur, Shailabh Rauniyar
Discovery of genes associated with sulfate-reducing bacteria biofilm using text mining and biological network analysis. BIBM 2021: 3589-3591
2010 – 2019
- 2017
- [j2]Etienne Z. Gnimpieba
Bio-TDS: bioscience query tool discovery system. Nucleic Acids Res. 45(Database-Issue): D1117-D1122 (2017) - [c7]Mariah M. Hoffman, Carrie J. Minette
NanoStringBioNet: Integrated R framework for bioscience knowledge discovery from NanoString nCounter data. BIBM 2017: 2157-2162 - 2015
- [j1]Carol M. Lushbough, Etienne Z. Gnimpieba
Life science data analysis workflow development using the bioextract server leveraging the iPlant collaborative cyberinfrastructure. Concurr. Comput. Pract. Exp. 27(2): 408-419 (2015) - [c6]Etienne Z. Gnimpieba
SBMLDock: Docker Driven Systems Biology Tool Development and Usage. CMSB 2015: 282-285 - 2014
- [c5]Etienne Z. Gnimpieba
RNA-seq gene and transcript expression analysis using the BioExtract server and iPlant collaborative. BCB 2014: 661-669 - [c4]Mathialakan Thavappiragasam, Carol M. Lushbough, Etienne Z. Gnimpieba
Heuristic parallelizable algorithm for similarity based biosystems comparison. BCB 2014: 782-789 - [c3]Mathialakan Thavappiragasam, Carol M. Lushbough, Etienne Z. Gnimpieba
Automatic biosystems comparison using semantic and name similarity. BCB 2014: 790-796 - [c2]Nick Weinandt, Laura M. Jackson
Pheno2GRN: a workflow for phenotype to gene network study and reverse engineering comparison. BCB 2014: 797-804 - 2013
- [c1]Carol Lushbough, Etienne Z. Gnimpieba
BioExtract Server, a Web-based workflow enabling system, leveraging iPlant collaborative resources. CLUSTER 2013: 1-3 - [i1]Etienne Z. Gnimpieba, Douglas M. Jennewein, Luke Fuhrman, Carol Lushbough:
Bioinformatics Knowledge Transmission (training, learning, and teaching): overview and flexible comparison of computer based training approaches. CoRR abs/1310.8383 (2013)
Coauthor Index
aka: Carol M. Lushbough
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