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Dagmar Iber
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2020 – today
- 2024
- [j14]Roman Vetter, Steve Runser, Dagmar Iber:
PolyHoop: Soft particle and tissue dynamics with topological transitions. Comput. Phys. Commun. 299: 109128 (2024) - [j13]Steve Runser, Roman Vetter, Dagmar Iber:
SimuCell3D: three-dimensional simulation of tissue mechanics with cell polarization. Nat. Comput. Sci. 4(4): 299-309 (2024) - [j12]Steve Runser, Roman Vetter, Dagmar Iber:
Publisher Correction: SimuCell3D: three-dimensional simulation of tissue mechanics with cell polarization. Nat. Comput. Sci. 4(5): 379 (2024)
2010 – 2019
- 2016
- [j11]Dagmar Iber, Zahra Karimaddini, Erkan Ünal:
Image-based modelling of organogenesis. Briefings Bioinform. 17(4): 616-627 (2016) - [j10]Harold F. Gómez, Michael Hucka, Sarah M. Keating, German Nudelman, Dagmar Iber, Stuart C. Sealfon:
MOCCASIN: converting MATLAB ODE models to SBML. Bioinform. 32(12): 1905-1906 (2016) - [j9]Patrick Fried, Máximo Sánchez-Aragón, Daniel Aguilar-Hidalgo, Birgitta Lehtinen, Fernando Casares, Dagmar Iber:
A Model of the Spatio-temporal Dynamics of Drosophila Eye Disc Development. PLoS Comput. Biol. 12(9) (2016) - [i3]Lucas Daniel Wittwer, Roberto Croce, Sebastian Aland, Dagmar Iber:
Simulating Organogenesis in COMSOL: Phase-Field Based Simulations of Embryonic Lung Branching Morphogenesis. CoRR abs/1610.09189 (2016) - 2015
- [j8]Simon Tanaka, David Sichau, Dagmar Iber:
LBIBCell: a cell-based simulation environment for morphogenetic problems. Bioinform. 31(14): 2340-2347 (2015) - [j7]Clemens Arthur Schwaninger, Denis Menshykau, Dagmar Iber:
Simulating Organogenesis: Algorithms for the Image-Based Determination of Displacement Fields. ACM Trans. Model. Comput. Simul. 25(2): 10:1-10:19 (2015) - [i2]Dagmar Iber, Zahra Karimaddini, Erkan Ünal:
Image-based Modelling of Organogenesis. CoRR abs/1510.05533 (2015) - 2014
- [i1]Zahra Karimaddini, Erkan Unal, Denis Menshykau, Dagmar Iber:
Simulating Organogenesis in COMSOL: Image-based Modeling. CoRR abs/1408.1589 (2014) - 2013
- [j6]Dagmar Iber, Christian Geyter:
Computational modelling of bovine ovarian follicle development. BMC Syst. Biol. 7: 60 (2013) - [c2]Srivathsan Adivarahan, Denis Menshykau, Odyssé Michos, Dagmar Iber:
Dynamic Image-Based Modelling of Kidney Branching Morphogenesis. CMSB 2013: 106-119 - 2012
- [j5]Torsten Schwede, Dagmar Iber:
ECCB 2012: The 11th European Conference on Computational Biology. Bioinform. 28(18): 303-305 (2012) - [j4]Denis Menshykau, Conradin Kraemer, Dagmar Iber:
Branch Mode Selection during Early Lung Development. PLoS Comput. Biol. 8(2) (2012) - 2011
- [j3]Dagmar Iber:
Inferring Biological Mechanisms by Data-Based Mathematical Modelling: Compartment-Specific Gene Activation during Sporulation in Bacillus subtilis as a Test Case. Adv. Bioinformatics 2011: 124062:1-124062:12 (2011) - [j2]Geraldine Cellière, Georgios Fengos, Marianne Hervé, Dagmar Iber:
The plasticity of TGF-β signaling. BMC Syst. Biol. 5: 184 (2011) - 2010
- [c1]Dagmar Iber:
Reduction of a detailed biological signaling model. ICCS 2010: 987-996
2000 – 2009
- 2005
- [j1]Dagmar Iber:
The Mechanistic Basis of Compartmentalized Gene Expression in Bacillus subtilis. Nat. Comput. 4(4): 325-338 (2005)
Coauthor Index
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