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Nurit Haspel
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2020 – today
- 2024
- [j15]Nurit Haspel
, Hyunbum Jang
Allosteric Activation of RhoA Complexed with p115-RhoGEF Deciphered by Conformational Dynamics. J. Chem. Inf. Model. 64(3): 862-873 (2024) - [c25]Muneeba Jilani
Elucidating Cancer Subtypes by Using Epigenome and Genome Cross-Talk. IWBBIO (1) 2024: 3-16 - 2023
- [c24]Muneeba Jilani
Investigating the Role of Gene Body Methylation and CpG Methylation in Cancer Subtyping. ICBRA 2023: 53-58 - 2021
- [c23]Muneeba Jilani, Alistair Turcan, Nurit Haspel, Filip Jagodzinski:
Assessing the Effects of Amino Acid Insertion and Deletion Mutations. BIBM 2021: 2511-2518 - 2020
- [j14]Amir Vajdi, Kourosh Zarringhalam, Nurit Haspel:
Patch-DCA: improved protein interface prediction by utilizing structural information and clustering DCA scores. Bioinform. 36(5): 1460-1467 (2020)
2010 – 2019
- 2019
- [c22]Amir Vajdi, Arpita Joshi, Nurit Haspel:
Integrating Co-Evolutionary Information in Monte Carlo Based Method for Proteins Trajectory Simulation. BCB 2019: 598-603 - 2017
- [j13]Nurit Haspel, Dong Luo, Eduardo Gonzalez:
Detecting intermediate protein conformations using algebraic topology. BMC Bioinform. 18(15): 31-39 (2017) - [j12]Nurit Haspel, Thomas R. Ioerger, Hisham Al-Mubaid
Introduction to selected papers from the 8th International Conference on Bioinformatics and Computational Biology (BICOB 2016). J. Bioinform. Comput. Biol. 15(3): 1702002:1-1702002:2 (2017) - [j11]Jing He, Nurit Haspel, Brian Chen:
Preface: Selected Articles from 2015 Computational Structural Bioinformatics Workshop. J. Comput. Biol. 24(1): 1 (2017) - [j10]Roshanak Farhoodi, Bahar Akbal-Delibas
Machine Learning Approaches for Predicting Protein Complex Similarity. J. Comput. Biol. 24(1): 40-51 (2017) - [c21]Roshanak Farhoodi, Max Shelbourne, Rebecca Hsieh, Nurit Haspel, Brian Hutchinson
Predicting the Effect of Point Mutations on Protein Structural Stability. BCB 2017: 247-252 - [c20]Nurit Haspel, Amarda Shehu, Kevin Molloy:
The 2017 Computational Structural Bioinformatics Workshop: CSBW 2017. BCB 2017: 643 - [c19]Roshanak Farhoodi, Bahar Akbal-Delibas
Ranking Protein-Protein Binding Using Evolutionary Information and Machine Learning. BCB 2017: 667-672 - [c18]Hamidreza Mohebbi, Amir Vajdi, Nurit Haspel, Dan A. Simovici:
Detecting chromosomal structural variation using jaccard distance and parallel architecture. BIBM 2017: 1959-1964 - [e1]Nurit Haspel, Lenore J. Cowen, Amarda Shehu, Tamer Kahveci, Giuseppe Pozzi:
Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2017, Boston, MA, USA, August 20-23, 2017. ACM 2017, ISBN 978-1-4503-4722-8 [contents] - 2016
- [j9]Fahad Saeed, Nurit Haspel, Hisham Al-Mubaid
Introduction to the selected papers from the 7th International Conference on Bioinformatics and Computational Biology (BICoB 2015). J. Bioinform. Comput. Biol. 14(3): 1602002:1-1602002:3 (2016) - [j8]Bahar Akbal-Delibas
Accurate refinement of docked protein complexes using evolutionary information and deep learning. J. Bioinform. Comput. Biol. 14(3): 1642002:1-1642002:16 (2016) - [c17]Erik Andersson, Rebecca Hsieh, Howard Szeto, Roshanak Farhoodi, Nurit Haspel, Filip Jagodzinski:
Assessing how multiple mutations affect protein stability using rigid cluster size distributions. ICCABS 2016: 1-6 - [c16]Nurit Haspel, Dong Luo, Eduardo Gonzalez:
Detecting intermediate protein conformations using algebraic topology. ICCABS 2016: 1 - 2015
- [j7]Jing He
The 7th Computational Structural Bioinformatics Workshop. J. Comput. Biol. 22(9): 785-786 (2015) - [j6]Bahar Akbal-Delibas
Accurate Prediction of Docked Protein Structure Similarity. J. Comput. Biol. 22(9): 892-904 (2015) - [c15]Amir Vajdi, Nurit Haspel, Hadi Banaee
A new DP algorithm for comparing gene expression data using geometric similarity. BIBM 2015: 1157-1161 - [c14]Roshanak Farhoodi, Bahar Akbal-Delibas, Nurit Haspel:
Accurate prediction of docked protein structure similarity using neural networks and restricted Boltzmann machines. BIBM 2015: 1296-1303 - [c13]Amir Vajdi, Nurit Haspel, Hadi Banaee
A new DP algorithm for comparing gene expression data using geometric similarity. BIBM 2015: 1745-1747 - 2014
- [c12]Bahar Akbal-Delibas, Marc Pomplun, Nurit Haspel:
AccuRMSD: a machine learning approach to predicting structure similarity of docked protein complexes. BCB 2014: 289-296 - [c11]Rosanne Vetro, Roshanak Farhoodi, Rohith Kotla, Nurit Haspel, David Weisman, Jennifer Rosen, Dan A. Simovici:
TIDE: Inter-chromosomal translocation and insertion detection using embeddings. IEEE BigData 2014: 64-70 - 2013
- [c10]Filip Jagodzinski, Bahar Akbal-Delibas, Nurit Haspel:
An Evolutionary Conservation & Rigidity Analysis Machine Learning Approach for Detecting Critical Protein Residues. BCB 2013: 779 - [c9]Dong Luo, Nurit Haspel:
Multi-Resolution Rigidity-Based Sampling of Protein Conformational Paths. BCB 2013: 786 - 2012
- [j5]Bahar Akbal-Delibas
An Evolutionary conservation-Based Method for Refining and Reranking protein Complex Structures. J. Bioinform. Comput. Biol. 10(3) (2012) - [j4]Irina Hashmi, Bahar Akbal-Delibas
Guiding protein docking with Geometric and Evolutionary Information. J. Bioinform. Comput. Biol. 10(3) (2012) - [c8]Bahar Akbal-Delibas, Filip Jagodzinski, Nurit Haspel:
Towards a hybrid method for detecting critical protein residues. BIBM Workshops 2012: 82-85 - [c7]Bahar Akbal-Delibas, Nurit Haspel:
Refining multimeric protein complexes using conservation, electrostatics and probabilistic selection. BIBM Workshops 2012: 648-653 - [c6]Bahar Akbal-Delibas, Filip Jagodzinski, Nurit Haspel:
Combining conservation and rigidity methods to detect critical residues in proteins. BIBM Workshops 2012: 940 - [c5]Bahar Akbal-Delibas, Nurit Haspel:
An evolutionary-guided iterative refinement approach for protein multimers. BIBM Workshops 2012: 941 - [c4]Rosanne Vetro, Nurit Haspel, Dan A. Simovici:
Characterizing Intermediate Conformations in Protein Conformational Space. CIBB 2012: 70-80 - 2011
- [j3]Nurit Haspel, Amarda Shehu
The 5th International Conference on Bio-Inspired Models of Network, Information and Computing Systems (Bionetics 2010) Special Track on Bioinformatics. J. Bioinform. Comput. Biol. 9(3) (2011) - [c3]Irina Hashmi, Bahar Akbal-Delibas, Nurit Haspel, Amarda Shehu
Protein docking with information on evolutionary conserved interfaces. BIBM Workshops 2011: 358-365 - [c2]Bahar Akbal-Delibas, Irina Hashmi, Amarda Shehu
Refinement of docked protein complex structures using evolutionary traces. BIBM Workshops 2011: 400-404 - 2010
- [c1]Nurit Haspel:
Tracing Conformational Changes in Proteins Represented at a Coarse Level. BIONETICS 2010: 343-356
2000 – 2009
- 2009
- [j2]David Zanuy
Protein Segments with Conformationally Restricted Amino Acids Can Control Supramolecular Organization at the Nanoscale. J. Chem. Inf. Model. 49(7): 1623-1629 (2009) - 2006
- [b1]Nurit Haspel:
Computational modeling and prediction of self assembling [beta]-sheet rich protein structures. Tel Aviv University, Israel, 2006 - [j1]Gilad Wainreb, Nurit Haspel, Haim J. Wolfson, Ruth Nussinov
A permissive secondary structure-guided superposition tool for clustering of protein fragments toward protein structure prediction via fragment assembly. Bioinform. 22(11): 1343-1352 (2006)
Coauthor Index
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last updated on 2024-09-10 01:13 CEST by the dblp team
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