default search action
Dong Si
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
- [c38]Sugam Jaiswal, Joyce Lee, Joe Berria, Raviteja Tanikella, Annuska Zolyomi, Muhammad Aurangzeb Ahmad, Dong Si:
Building Personality-Adaptive Conversational AI for Mental Health Therapy. BCB 2024: 92:1 - [c37]Remya Mavila, Sugam Jaiswal, Raghav Naswa, Weichao Yuwen, Bill Erdly, Dong Si:
iCare - An AI - Powered Virtual Assistant for Mental Health. ICHI 2024: 466-471 - [c36]Raghav Naswa, Sugam Jaiswal, Remya Mavila, Weichao Yuwen, Bill Erdly, Dong Si:
Assessing Empathy in Mental Health Caregivers using Conversational AI. ICHI 2024: 538-540 - [i4]Xin Ma, Dong Si:
Beyond Current Boundaries: Integrating Deep Learning and AlphaFold for Enhanced Protein Structure Prediction from Low-Resolution Cryo-EM Maps. CoRR abs/2410.23321 (2024) - 2023
- [j9]Andrew Nakamura
, Hanze Meng, Minglei Zhao, Fengbin Wang, Jie Hou, Renzhi Cao
Fast and automated protein-DNA/RNA macromolecular complex modeling from cryo-EM maps. Briefings Bioinform. 24(2) (2023) - [j8]Lei Zhang, Sheng Wang, Jie Hou, Dong Si, Junyong Zhu, Renzhi Cao:
ComplexQA: a deep graph learning approach for protein complex structure assessment. Briefings Bioinform. 24(6) (2023) - 2022
- [j7]Kyle Hippe, Cade Lilley, Joshua William Berkenpas, Ciri Chandana Pocha, Kiyomi Kishaba, Hui Ding, Jie Hou, Dong Si, Renzhi Cao:
ZoomQA: residue-level protein model accuracy estimation with machine learning on sequential and 3D structural features. Briefings Bioinform. 23(1) (2022) - [j6]Nathan Ranno, Dong Si
Neural representations of cryo-EM maps and a graph-based interpretation. BMC Bioinform. 23-S(3): 397 (2022) - [c35]Mahdi Rahbar
Deep graph learning to estimate protein model quality using structural constraints from multiple sequence alignments. BCB 2022: 21:1-21:10 - [c34]Haowen Guan, Dong Si:
DeepTracer-Denoising: Deep Learning for 3D Electron Density Map Denoising. BIBM 2022: 2080-2087 - [c33]Jonathan Lee, Sarah Kopelovich, Sunny Chieh Cheng, Dong Si:
Psychosis iREACH: Reach for Psychosis Treatment using Artificial Intelligence. BIBM 2022: 2913-2920 - 2021
- [j5]Navjodh Singh Dhillon, Agustinus Sutandi, Manoj Vishwanath, Miranda M. Lim, Hung Cao
A Raspberry Pi-Based Traumatic Brain Injury Detection System for Single-Channel Electroencephalogram. Sensors 21(8): 2779 (2021) - [c32]Ploypaphat Saltz, Shih Yin Lin, Sunny Chieh Cheng, Dong Si:
Dementia Detection using Transformer-Based Deep Learning and Natural Language Processing Models. ICHI 2021: 509-510 - [i3]Navjodh Singh Dhillon, Agustinus Sutandi, Manoj Vishwanath, Miranda M. Lim, Hung Cao, Dong Si:
A Raspberry Pi-based Traumatic Brain Injury Detection System for Single-Channel Electroencephalogram. CoRR abs/2101.10869 (2021) - [i2]Dong Si, Andrew Nakamura, Runbang Tang, Haowen Guan, Jie Hou, Ammaar Firozi, Renzhi Cao, Kyle Hippe, Minglei Zhao:
Artificial Intelligence Advances for De Novo Molecular Structure Modeling in Cryo-EM. CoRR abs/2102.06125 (2021) - [i1]Ruiwen Xing, Thomas Humphries, Dong Si:
Self-Attention Generative Adversarial Network for Iterative Reconstruction of CT Images. CoRR abs/2112.12810 (2021) - 2020
- [j4]John Smith, Matthew Conover, Natalie Stephenson, Jesse Eickholt, Dong Si, Miao Sun, Renzhi Cao:
TopQA: a topological representation for single-model protein quality assessment with machine learning. Int. J. Comput. Biol. Drug Des. 13(1): 144-153 (2020) - [c31]William R. Kearns, Neha Kaura, Myra Divina, Cuong Vo, Dong Si, Teresa Ward, Weichao Yuwen
A Wizard-of-Oz Interface and Persona-based Methodology for Collecting Health Counseling Dialog. CHI Extended Abstracts 2020: 1-9
2010 – 2019
- 2019
- [c30]Jonas Pfab, Dong Si:
Automated Threshold Selection for Cryo-EM Density Maps. BCB 2019: 161-166 - [c29]Diem To, Dong Si, Ying Chen:
Traveler's Next Activity Predication with Location-Based Social Network Data. PredictGIS@SIGSPATIAL 2019: 15-23 - [c28]Dong Si, Sunny Chieh Cheng, Ruiwen Xing, Chang Liu, Hoi Yan Wu:
Scaling up Prediction of Psychosis by Natural Language Processing. ICTAI 2019: 339-347 - 2018
- [j3]Duncan Macmichael, Dong Si:
Machine Learning Classification of Tree Cover Type and Application to Forest Management. Int. J. Multim. Data Eng. Manag. 9(1): 1-21 (2018) - [j2]Albert Ng, Dong Si:
Beta-Barrel Detection for Medium Resolution Cryo-Electron Microscopy Density Maps Using Genetic Algorithms and Ray Tracing. J. Comput. Biol. 25(3): 326-336 (2018) - [c27]Jingjing Yang, Renzhi Cao, Dong Si:
EMNets: A Convolutional Autoencoder for Protein Surface Retrieval Based on Cryo-Electron Microscopy Imaging. BCB 2018: 639-644 - [c26]Todor K. Avramov, Dong Si:
Deep Learning for Resolution Validation of Three Dimensional Cryo-Electron Microscopy Density Maps. BCB 2018: 669-674 - [c25]Jessica Frierson, Dong Si:
Who's Next: Evaluating Attrition with Machine Learning Algorithms and Survival Analysis. BigData Congress 2018: 251-259 - [c24]Jewel Yun-Hsuan Lee, Michael Stiber, Dong Si:
Machine Learning of Spatiotemporal Bursting Behavior in Developing Neural Networks. EMBC 2018: 348-351 - [c23]Benjamin Pittman, Reza Hosseini Ghomi
Parkinson's Disease Classification of mPower Walking Activity Participants. EMBC 2018: 4253-4256 - [c22]Yi-Hsin Hsu, Dong Si:
Cancer Type Prediction and Classification Based on RNA-sequencing Data. EMBC 2018: 5374-5377 - [c21]Albert Ng, Adedayo Odesile, Dong Si:
GPU Accelerated Ray Tracing for the Beta-Barrel Detection from Three-Dimensional Cryo-EM Maps. ISBRA 2018: 217-226 - 2017
- [c20]Michael Nissenson, Dong Si:
Automated Protein Chain Isolation from 3D Cryo-EM Data and Volume Comparison Tool. BCB 2017: 685-690 - [c19]Peter Collins, Dong Si:
A Graph Based Method for the Prediction of Backbone Trace from Cryo-EM Density Maps. BCB 2017: 691-697 - [c18]R. Alan Burnett, Dong Si:
Prediction of Injuries and Fatalities in Aviation Accidents through Machine Learning. ICCDA 2017: 60-68 - [c17]Todor K. Avramov, Dong Si:
Comparison of Feature Reduction Methods and Machine Learning Models for Breast Cancer Diagnosis. ICCDA 2017: 69-74 - [c16]Joe Ma, Dong Si:
Analyze NYC Transportation to Mitigate Speeding and Explore New Business Models Using Machine Learning. ICCDA 2017: 75-80 - [c15]Duncan Macmichael, Dong Si:
Addressing Forest Management Challenges by Refining Tree Cover Type Classification with Machine Learning Models. IRI 2017: 177-183 - [c14]Albert Ng, Dong Si:
Genetic Algorithm Based Beta-Barrel Detection for Medium Resolution Cryo-EM Density Maps. ISBRA 2017: 174-185 - [c13]Elizaveta Kosiachenko, Dong Si:
Classification of Brain Activity Using Brainwaves Recorded by Consumer-grade EEG Devices. MDA 2017: 14-24 - [c12]Nathaniel Grabaskas, Dong Si:
Anomaly Detection from Kepler Satellite Time-Series Data. MLDM 2017: 220-232 - [c11]Ruth M. Ogunnaike, Dong Si:
Prediction of Insurance Claim Severity Loss Using Regression Models. MLDM 2017: 233-247 - 2016
- [c10]Dong Si:
Automatic Detection of Beta-barrel from Medium Resolution Cryo-EM Density Maps. BCB 2016: 156-164 - [c9]Rongjian Li, Dong Si, Tao Zeng, Shuiwang Ji
Deep convolutional neural networks for detecting secondary structures in protein density maps from cryo-electron microscopy. BIBM 2016: 41-46 - 2015
- [c8]Jing He
Detection of Secondary Structures from 3D Protein Images of Medium Resolutions and its Challenges. ICIG (2) 2015: 147-155 - 2014
- [c7]Dong Si, Jing He
Orientations of beta-strand traces and near maximum twist. BCB 2014: 690-694 - [c6]Dong Si, Jing He
Combining image processing and modeling to generate traces of beta-strands from cryo-EM density images of beta-barrels. EMBC 2014: 3941-3944 - 2013
- [c5]Kamal Al-Nasr, Lin Chen, Desh Ranjan, Mohammad Zubair, Dong Si, Jing He
A Constrained K-shortest Path Algorithm to Rank the Topologies of the Protein Secondary Structure Elements Detected in CryoEM Volume Maps. BCB 2013: 749 - [c4]Dong Si, Jing He
Beta-sheet Detection and Representation from Medium Resolution Cryo-EM Density Maps. BCB 2013: 764 - 2012
- [j1]Abhishek Biswas
Improved Efficiency in Cryo-EM Secondary Structure Topology Determination from Inaccurate Data. J. Bioinform. Comput. Biol. 10(3) (2012) - [c3]Kamal Al-Nasr, Lin Chen, Dong Si, Desh Ranjan, Mohammad Zubair, Jing He
Building the initial chain of the proteins through de novo modeling of the cryo-electron microscopy volume data at the medium resolutions. BCB 2012: 490-497 - [c2]Andrew McKnight, Kamal Al-Nasr, Dong Si, Andrey N. Chernikov, Nikos Chrisochoides, Jing He
CryoEM skeleton length estimation using a decimated curve. BIBM Workshops 2012: 109-113 - 2011
- [c1]Abhishek Biswas
A Constraint Dynamic Graph Approach to Identify the Secondary Structure Topology from cryoEM Density Data in Presence of Errors. BIBM 2011: 160-163
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from ,
, and
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and
to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-12-18 18:28 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by: