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Benno Schwikowski
Person information
- affiliation: Institut Pasteur, Paris, France
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2020 – today
- 2024
- [c12]Johann Dréo, Claire Laudy, Sebastian Lobentanzer, Marko Baric, Ekaterina Gaydukova, Benno Schwikowski:
Reproducible Mapping of Tabular Data into Semantic Knowledge Graphs with OntoWeaver and BioCypher. FUSION 2024: 1-8 - 2022
- [j18]Farzaneh Firoozbakht
, Behnam Yousefi
An overview of machine learning methods for monotherapy drug response prediction. Briefings Bioinform. 23(1) (2022)
2010 – 2019
- 2018
- [i2]Barry Demchak
The Cytoscape Automation app article collection. F1000Research 7: 800 (2018) - 2017
- [j17]Cheikh Loucoubar, Audrey V. Grant, Jean-François Bureau, Isabelle Casademont, Ndjido Ardo Bar, Avner Bar-Hen, Mamadou Diop, Joseph Faye, Fatoumata Diene Sarr, Abdoulaye Badiane, Adama Tall, Jean-François Trape, Freddy Cliquet, Benno Schwikowski
Detecting multi-way epistasis in family-based association studies. Briefings Bioinform. 18(3): 394-402 (2017) - [j16]Frederik Gwinner
Network-based analysis of omics data: the LEAN method. Bioinform. 33(5): 701-709 (2017) - 2015
- [j15]Oriol Guitart-Pla, Manjunath Kustagi
The Cyni framework for network inference in Cytoscape. Bioinform. 31(9): 1499-1501 (2015) - 2014
- [i1]Alexander R. Pico
The Cytoscape app article collection. F1000Research 3: 138 (2014) - 2012
- [j14]Sébastien Li-Thiao-Té
Feature Detection with Controlled Error Rates in LC/MS Images. J. Comput. Biol. 19(4): 349-364 (2012) - [j13]Laura Elo
Mining proteomic data for biomedical research. WIREs Data Mining Knowl. Discov. 2(1): 1-13 (2012) - 2010
- [j12]Aurélien Mazurie
Evolution of metabolic network organization. BMC Syst. Biol. 4: 59 (2010) - [c11]Søren Besenbacher
Indexing and Searching a Mass Spectrometry Database. Algorithms and Applications 2010: 62-76
2000 – 2009
- 2008
- [j11]Aurélien Mazurie
Phylogenetic distances are encoded in networks of interacting pathways. Bioinform. 24(22): 2579-2585 (2008) - 2007
- [j10]Olivier Garcia, Cosmin Saveanu
GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring. Bioinform. 23(3): 394-396 (2007) - 2006
- [j9]Tero Aittokallio
Graph-based methods for analysing networks in cell biology. Briefings Bioinform. 7(3): 243-255 (2006) - 2005
- [j8]David J. Reiss, Iliana Avila-Campillo, Vesteinn Thorsson, Benno Schwikowski
Tools enabling the elucidation of molecular pathways active in human disease: Application to Hepatitis C virus infection. BMC Bioinform. 6: 154 (2005) - 2004
- [j7]Amir Ben-Dor, Tzvika Hartman, Richard M. Karp, Benno Schwikowski
Towards Optimally Multiplexed Applications of Universal Arrays. J. Comput. Biol. 11(2/3): 476-492 (2004) - [c10]David J. Reiss, Benno Schwikowski
Predicting protein-peptide interactions via a network-based motif sampler. ISMB/ECCB (Supplement of Bioinformatics) 2004: 274-282 - 2003
- [j6]Benno Schwikowski
Weighted sequence graphs: boosting iterated dynamic programming using locally suboptimal solutions. Discret. Appl. Math. 127(1): 95-117 (2003) - [j5]Amir Ben-Dor, Richard M. Karp, Benno Schwikowski
The Restriction Scaffold Problem. J. Comput. Biol. 10(3/4): 385-398 (2003) - [c9]Amir Ben-Dor, Tzvika Hartman, Benno Schwikowski
Towards optimally multiplexed applications of universal DNA tag systems. RECOMB 2003: 48-56 - 2002
- [j4]Benno Schwikowski
On enumerating all minimal solutions of feedback problems. Discret. Appl. Math. 117(1-3): 253-265 (2002) - [j3]Mathieu Blanchette, Benno Schwikowski
Algorithms for Phylogenetic Footprinting. J. Comput. Biol. 9(2): 211-223 (2002) - [c8]Benno Schwikowski:
Algorithmic Challenges in Mass Spectrometry and Systems Biology. GI Jahrestagung (Ergänzungsband) 2002: 66 - [c7]Trey Ideker, Owen Ozier, Benno Schwikowski, Andrew F. Siegel:
Discovering regulatory and signalling circuits in molecular interaction networks. ISMB 2002: 233-240 - [c6]Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Ron Shamir:
The restriction scaffold problem. RECOMB 2002: 58-66 - 2000
- [j2]Amir Ben-Dor, Richard M. Karp, Benno Schwikowski
Universal DNA Tag Systems: A Combinatorial Design Scheme. J. Comput. Biol. 7(3-4): 503-519 (2000) - [c5]Mathieu Blanchette, Benno Schwikowski, Martin Tompa:
An Exact Algorithm to Identify Motifs in Orthologous Sequences from Multiple Species. ISMB 2000: 37-45 - [c4]Amir Ben-Dor, Richard M. Karp, Benno Schwikowski
Universal DNA tag systems: a combinatorial design scheme. RECOMB 2000: 65-75
1990 – 1999
- 1997
- [j1]Benno Schwikowski
The Deferred Path Heuristic for the Generalized Tree Alignment Problem. J. Comput. Biol. 4(3): 415-431 (1997) - [c3]Benno Schwikowski
The deferred path heuristic for the generalized tree alignment problem. RECOMB 1997: 257-266 - 1996
- [c2]Benno Schwikowski
A Clustering Approach to Generalized Tree Alignment with Application to Alu Repeats. German Conference on Bioinformatics - Selected Papers 1996: 115-124 - [c1]Benno Schwikowski, Martin Vingron:
Attacking Generalized tree Alignment by a Deferred Path Heuristic. German Conference on Bioinformatics 1996: 302-304
Coauthor Index
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last updated on 2024-10-25 20:15 CEST by the dblp team
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