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Abigail Morrison
Person information
- affiliation: Jülich Supercomputing Centre (JSC), Institute for Advanced Simulation, Germany
- affiliation: Ruhr University Bochum, Institute of Cognitive Neuroscience, Germany
- affiliation (PhD 2005): University of Freiburg, Bernstein Center , Germany
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2020 – today
- 2024
- [j45]Lionel Kusch, Sandra Diaz-Pier, Wouter Klijn, Kim Sontheimer, Christophe Bernard, Abigail Morrison, Viktor K. Jirsa:
Multiscale co-simulation design pattern for neuroscience applications. Frontiers Neuroinformatics 18 (2024) - [j44]Cristian Jimenez-Romero, Alper Yegenoglu, Aarón Pérez Martín, Sandra Diaz-Pier, Abigail Morrison:
Emergent communication enhances foraging behavior in evolved swarms controlled by spiking neural networks. Swarm Intell. 18(1): 1-29 (2024) - [c12]Jinyang Yu, Sami Hamdan, Leonard Sasse, Abigail Morrison, Kaustubh R. Patil:
Empirical Comparison Between Cross-Validation and Mutation-Validation in Model Selection. IDA (2) 2024: 56-67 - [d9]Charl A. P. Linssen, Pooja N. Babu, Bernhard Rumpe, Abigail Morrison:
NESTML 7.0.1-rc1. Zenodo, 2024 - [d8]Charl A. P. Linssen, Pooja N. Babu, Bernhard Rumpe, Abigail Morrison:
NESTML 7.0.1. Zenodo, 2024 - 2023
- [c11]Alessio Quercia, Abigail Morrison, Hanno Scharr, Ira Assent:
SGD Biased towards Early Important Samples for Efficient Training. ICDM 2023: 1289-1294 - [d7]Charl A. P. Linssen, Pooja N. Babu, Mohamed Ayssar Benelhedi, Jochen M. Eppler, Bernhard Rumpe, Abigail Morrison:
NESTML 5.3.0. Zenodo, 2023 - [d6]Charl A. P. Linssen, Pooja N. Babu, Mohamed Ayssar Benelhedi, Jan Vogelsang, Angela M. Fischer, Jochen M. Eppler, Bernhard Rumpe, Abigail Morrison:
NESTML 5.2.0. Zenodo, 2023 - [d5]Charl A. P. Linssen, Pooja N. Babu, Jochen M. Eppler, Leander Ewert, Krzysztof Blaszczyk, Willem Wybo, Beck Strohmer, Bernhard Rumpe, Abigail Morrison:
NESTML 7.0.0. Version 2. Zenodo, 2023 [all versions] - [d4]Charl A. P. Linssen, Pooja N. Babu, Levin Schmidt, Tom Tetzlaff, Maryada, Mohamed Ayssar Benelhedi, Jochen M. Eppler, Bernhard Rumpe, Abigail Morrison:
NESTML 6.0.0. Version 6.0.0. Zenodo, 2023 [all versions] - [i8]Bruno Golosio, Jose Villamar, Gianmarco Tiddia, Elena Pastorelli, Jonas Stapmanns, Viviana Fanti, Pier Stanislao Paolucci, Abigail Morrison, Johanna Senk:
Runtime Construction of Large-Scale Spiking Neuronal Network Models on GPU Devices. CoRR abs/2306.09855 (2023) - [i7]Jinyang Yu, Sami Hamdan, Leonard Sasse, Abigail Morrison, Kaustubh R. Patil:
Empirical Comparison between Cross-Validation and Mutation-Validation in Model Selection. CoRR abs/2311.14079 (2023) - 2022
- [j43]Alper Yegenoglu, Anand Subramoney, Thorsten Hater, Cristian Jimenez-Romero, Wouter Klijn, Aaron Perez Martin, Michiel van der Vlag, Michael Herty, Abigail Morrison, Sandra Diaz-Pier:
Exploring Parameter and Hyper-Parameter Spaces of Neuroscience Models on High Performance Computers With Learning to Learn. Frontiers Comput. Neurosci. 16: 885207 (2022) - [j42]Benedikt Feldotto, Jochen Martin Eppler, Cristian Jimenez-Romero, Christopher Bignamini, Carlos Enrique Gutierrez, Ugo Albanese, Eloy Retamino, Viktor Vorobev, Vahid Zolfaghari, Alex Upton, Zhe Sun, Hiroshi Yamaura, Morteza Heidarinejad, Wouter Klijn, Abigail Morrison, Felipe Cruz, Colin McMurtrie, Alois C. Knoll, Jun Igarashi, Tadashi Yamazaki, Kenji Doya, Fabrice O. Morin:
Deploying and Optimizing Embodied Simulations of Large-Scale Spiking Neural Networks on HPC Infrastructure. Frontiers Neuroinformatics 16: 884180 (2022) - [j41]Guido Trensch, Abigail Morrison:
A System-on-Chip Based Hybrid Neuromorphic Compute Node Architecture for Reproducible Hyper-Real-Time Simulations of Spiking Neural Networks. Frontiers Neuroinformatics 16 (2022) - [j40]Espen Hagen, Steinn H. Magnusson, Torbjørn V. Ness, Geir Halnes, Pooja N. Babu, Charl A. P. Linssen, Abigail Morrison, Gaute T. Einevoll:
Brain signal predictions from multi-scale networks using a linearized framework. PLoS Comput. Biol. 18(8) (2022) - [d3]Charl A. P. Linssen, Pooja N. Babu, Mohamed Ayssar Benelhedi, Robin De Schepper, Tanguy Fardet, Jochen Martin Eppler, Bernhard Rumpe, Abigail Morrison:
NESTML 5.0.0. Zenodo, 2022 - [d2]Charl A. P. Linssen, Pooja N. Babu, Jingxuan He, Jochen Martin Eppler, Bernhard Rumpe, Abigail Morrison:
NESTML 5.1.0. Zenodo, 2022 - [i6]Alper Yegenoglu, Anand Subramoney, Thorsten Hater, Cristian Jimenez-Romero, Wouter Klijn, Aaron Perez Martin, Michiel van der Vlag, Michael Herty, Abigail Morrison, Sandra Diaz-Pier:
Exploring hyper-parameter spaces of neuroscience models on high performance computers with Learning to Learn. CoRR abs/2202.13822 (2022) - [i5]Agnes Korcsak-Gorzo, Charl A. P. Linssen, Jasper Albers, Stefan Dasbach, Renato C. Duarte, Susanne Kunkel, Abigail Morrison, Johanna Senk, Jonas Stapmanns, Tom Tetzlaff, Markus Diesmann, Sacha J. van Albada:
Phenomenological modeling of diverse and heterogeneous synaptic dynamics at natural density. CoRR abs/2212.05354 (2022) - [i4]Cristian Jimenez-Romero, Alper Yegenoglu, Aarón Pérez Martín, Sandra Diaz-Pier, Abigail Morrison:
Emergent communication enhances foraging behaviour in evolved swarms controlled by Spiking Neural Networks. CoRR abs/2212.08484 (2022) - 2021
- [j39]Philipp Weidel, Renato C. Duarte, Abigail Morrison:
Unsupervised Learning and Clustered Connectivity Enhance Reinforcement Learning in Spiking Neural Networks. Frontiers Comput. Neurosci. 15: 543872 (2021) - [j38]Patrick Herbers, Iago Calvo, Sandra Diaz-Pier, Óscar D. Robles, Susana Mata, Pablo Toharia, Luis Pastor, Alexander Peyser, Abigail Morrison, Wouter Klijn:
ConGen - A Simulator-Agnostic Visual Language for Definition and Generation of Connectivity in Large and Multiscale Neural Networks. Frontiers Neuroinformatics 15: 766697 (2021) - [d1]Pooja N. Babu, Charl A. P. Linssen, Jochen Martin Eppler, Tobias Schulte to Brinke, Abolfazl Ziaeemehr, Tanguy Fardet, Younes Bouhadjar, Renato C. Duarte, Bernhard Rumpe, Abigail Morrison:
NESTML 4.0. Zenodo, 2021 - 2020
- [j37]Claudia Bachmann, Tom Tetzlaff, Renato C. Duarte, Abigail Morrison:
Firing rate homeostasis counteracts changes in stability of recurrent neural networks caused by synapse loss in Alzheimer's disease. PLoS Comput. Biol. 16(8) (2020)
2010 – 2019
- 2019
- [j36]Jakob Jordan, Philipp Weidel, Abigail Morrison:
A Closed-Loop Toolchain for Neural Network Simulations of Learning Autonomous Agents. Frontiers Comput. Neurosci. 13: 46 (2019) - [j35]Barna Zajzon, Sepehr Mahmoudian, Abigail Morrison, Renato Carlos Farinha Duarte:
Passing the Message: Representation Transfer in Modular Balanced Networks. Frontiers Comput. Neurosci. 13: 79 (2019) - [j34]Renato C. Duarte, Abigail Morrison:
Leveraging heterogeneity for neural computation with fading memory in layer 2/3 cortical microcircuits. PLoS Comput. Biol. 15(4) (2019) - [c10]Wouter Klijn, Sandra Diaz-Pier, Abigail Morrison, Alexander Peyser:
Staged deployment of interactive multi-application HPC workflows. HPCS 2019: 305-311 - [i3]Wouter Klijn, Sandra Diaz-Pier, Abigail Morrison, Alexander Peyser:
Staged deployment of interactive multi-application HPC workflows. CoRR abs/1907.12275 (2019) - 2018
- [j33]Christian Nowke, Sandra Diaz-Pier, Benjamin Weyers, Bernd Hentschel, Abigail Morrison, Torsten W. Kuhlen, Alexander Peyser:
Toward Rigorous Parameterization of Underconstrained Neural Network Models Through Interactive Visualization and Steering of Connectivity Generation. Frontiers Neuroinformatics 12: 32 (2018) - [j32]Robin Pauli, Philipp Weidel, Susanne Kunkel, Abigail Morrison:
Reproducing Polychronization: A Guide to Maximizing the Reproducibility of Spiking Network Models. Frontiers Neuroinformatics 12: 46 (2018) - [j31]Inga Blundell, Dimitri Plotnikov, Jochen M. Eppler, Abigail Morrison:
Automatically Selecting a Suitable Integration Scheme for Systems of Differential Equations in Neuron Models. Frontiers Neuroinformatics 12: 50 (2018) - [j30]Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael W. Hopkins, Pramod S. Kumbhar, David R. Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam R. Tomkins, Guido Trensch, Michael Marmaduke Woodman, Jochen Martin Eppler:
Code Generation in Computational Neuroscience: A Review of Tools and Techniques. Frontiers Neuroinformatics 12: 68 (2018) - [j29]Guido Trensch, Robin Gutzen, Inga Blundell, Michael Denker, Abigail Morrison:
Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data. Frontiers Neuroinformatics 12: 81 (2018) - [c9]Renato C. Duarte, Marvin Uhlmann, Dick den van Broek, Hartmut Fitz, Karl Magnus Petersson, Abigail Morrison:
Encoding symbolic sequences with spiking neural reservoirs. IJCNN 2018: 1-8 - [c8]Barna Zajzon, Renato C. Duarte, Abigail Morrison:
Transferring State Representations in Hierarchical Spiking Neural Networks. IJCNN 2018: 1-9 - 2017
- [j28]Jyotika Bahuguna, Tom Tetzlaff, Arvind Kumar, Jeanette Hellgren Kotaleski, Abigail Morrison:
Homologous Basal Ganglia Network Models in Physiological and Parkinsonian Conditions. Frontiers Comput. Neurosci. 11: 79 (2017) - 2016
- [j27]Yansong Chua, Abigail Morrison:
Effects of Calcium Spikes in the Layer 5 Pyramidal Neuron on Coincidence Detection and Activity Propagation. Frontiers Comput. Neurosci. 10: 76 (2016) - [j26]Philipp Weidel, Mikael Djurfeldt, Renato C. Duarte, Abigail Morrison:
Closed Loop Interactions between Spiking Neural Network and Robotic Simulators Based on MUSIC and ROS. Frontiers Neuroinformatics 10: 31 (2016) - [c7]Dimitri Plotnikov, Inga Blundell, Tammo Ippen, Jochen Martin Eppler, Abigail Morrison, Bernhard Rumpe:
NESTML: a modeling language for spiking neurons. Modellierung 2016: 93-108 - [i2]Philipp Weidel, Mikael Djurfeldt, Renato Carlos Farinha Duarte, Abigail Morrison:
Closed loop interactions between spiking neural network and robotic simulators based on MUSIC and ROS. CoRR abs/1604.04764 (2016) - [i1]Dimitri Plotnikov, Bernhard Rumpe, Inga Blundell, Tammo Ippen, Jochen Martin Eppler, Abigail Morrison:
NESTML: a modeling language for spiking neurons. CoRR abs/1606.02882 (2016) - 2015
- [j25]Yansong Chua, Moritz Helias, Abigail Morrison:
Modeling the calcium spike as a threshold triggered fixed waveform for synchronous inputs in the fluctuation regime. Frontiers Comput. Neurosci. 9: 91 (2015) - [j24]Yury V. Zaytsev, Abigail Morrison, Moritz Deger:
Reconstruction of recurrent synaptic connectivity of thousands of neurons from simulated spiking activity. J. Comput. Neurosci. 39(1): 77-103 (2015) - 2014
- [j23]Renato Carlos Farinha Duarte, Abigail Morrison:
Dynamic stability of sequential stimulus representations in adapting neuronal networks. Frontiers Comput. Neurosci. 8: 124 (2014) - [j22]Carlos Toledo-Suárez, Renato Carlos Farinha Duarte, Abigail Morrison:
Liquid computing on and off the edge of chaos with a striatal microcircuit. Frontiers Comput. Neurosci. 8: 130 (2014) - [j21]Yury V. Zaytsev, Abigail Morrison:
CyNEST: a maintainable Cython-based interface for the NEST simulator. Frontiers Neuroinformatics 8: 23 (2014) - [j20]Susanne Kunkel, Maximilian Schmidt, Jochen Martin Eppler, Hans Ekkehard Plesser, Gen Masumoto, Jun Igarashi, Shin Ishii, Tomoki Fukai, Abigail Morrison, Markus Diesmann, Moritz Helias:
Spiking network simulation code for petascale computers. Frontiers Neuroinformatics 8: 78 (2014) - [c6]Renato Carlos Farinha Duarte, Peggy Seriès, Abigail Morrison:
Self-Organized Artificial Grammar Learning in Spiking Neural Networks. CogSci 2014 - [r1]Hans Ekkehard Plesser, Markus Diesmann, Marc-Oliver Gewaltig, Abigail Morrison:
NEST: The Neural Simulation Tool. Encyclopedia of Computational Neuroscience 2014 - 2013
- [c5]Sacha J. van Albada, Susanne Kunkel, Abigail Morrison, Markus Diesmann:
Integrating Brain Structure and Dynamics on Supercomputers. BrainComp 2013: 22-32 - 2012
- [j19]Moritz Helias, Susanne Kunkel, Gen Masumoto, Jun Igarashi, Jochen Martin Eppler, Shin Ishii, Tomoki Fukai, Abigail Morrison, Markus Diesmann:
Supercomputers Ready for Use as Discovery Machines for Neuroscience. Frontiers Neuroinformatics 6: 26 (2012) - [j18]Yury V. Zaytsev, Abigail Morrison:
Increasing quality and managing complexity in neuroinformatics software development with continuous integration. Frontiers Neuroinformatics 6: 31 (2012) - [c4]Jenia Jitsev, Nobi Abraham, Abigail Morrison, Marc Tittgemeyer:
Learning from Delayed Reward und Punishment in a Spiking Neural Network Model of Basal Ganglia with Opposing D1/D2 Plasticity. ICANN (1) 2012: 459-466 - [c3]Jenia Jitsev, Abigail Morrison, Marc Tittgemeyer:
Learning from positive and negative rewards in a spiking neural network model of basal ganglia. IJCNN 2012: 1-8 - 2011
- [j17]Susanne Kunkel, Tobias C. Potjans, Jochen M. Eppler, Hans Ekkehard Plesser, Abigail Morrison, Markus Diesmann:
Meeting the Memory Challenges of Brain-Scale Network Simulation. Frontiers Neuroinformatics 5: 35 (2011) - [j16]Alexander Hanuschkin, J. Michael Herrmann, Abigail Morrison, Markus Diesmann:
Compositionality of arm movements can be realized by propagating synchrony. J. Comput. Neurosci. 30(3): 675-697 (2011) - [j15]Alexander Hanuschkin, Markus Diesmann, Abigail Morrison:
A reafferent and feed-forward model of song syntax generation in the Bengalese finch. J. Comput. Neurosci. 31(3): 509-532 (2011) - [j14]Wiebke Potjans, Markus Diesmann, Abigail Morrison:
An Imperfect Dopaminergic Error Signal Can Drive Temporal-Difference Learning. PLoS Comput. Biol. 7(5) (2011) - 2010
- [j13]Denise Berger, Christian Borgelt, Sebastien Louis, Abigail Morrison, Sonja Grün:
Efficient Identification of Assembly Neurons within Massively Parallel Spike Trains. Comput. Intell. Neurosci. 2010: 439648:1-439648:18 (2010) - [j12]Wiebke Potjans, Abigail Morrison, Markus Diesmann:
Enabling Functional Neural Circuit Simulations with Distributed Computing of Neuromodulated Plasticity. Frontiers Comput. Neurosci. 4: 141 (2010) - [j11]Sven Schrader, Markus Diesmann, Abigail Morrison:
A Compositionality Machine Realized by a Hierarchic Architecture of Synfire Chains. Frontiers Comput. Neurosci. 4: 154 (2010) - [j10]Susanne Kunkel, Markus Diesmann, Abigail Morrison:
Limits to the Development of Feed-Forward Structures in Large Recurrent Neuronal Networks. Frontiers Comput. Neurosci. 4: 160 (2010) - [j9]Alexander Hanuschkin, Susanne Kunkel, Moritz Helias, Abigail Morrison, Markus Diesmann:
A General and Efficient Method for Incorporating Precise Spike Times in Globally Time-Driven Simulations. Frontiers Neuroinformatics 4: 113 (2010)
2000 – 2009
- 2009
- [j8]Wiebke Potjans, Abigail Morrison, Markus Diesmann:
A Spiking Neural Network Model of an Actor-Critic Learning Agent. Neural Comput. 21(2): 301-339 (2009) - 2008
- [j7]Abigail Morrison, Markus Diesmann, Wulfram Gerstner:
Phenomenological models of synaptic plasticity based on spike timing. Biol. Cybern. 98(6): 459-478 (2008) - 2007
- [j6]Romain Brette, Michelle Rudolph, Ted Carnevale, Michael L. Hines, David Beeman, James M. Bower, Markus Diesmann, Abigail Morrison, Philip H. Goodman, Frederick C. Harris Jr., Milind Zirpe, Thomas Natschläger, Dejan Pecevski, Bard Ermentrout, Mikael Djurfeldt, Anders Lansner, Olivier Rochel, Thierry Viéville, Eilif Mueller, Andrew P. Davison, Sami El Boustani, Alain Destexhe:
Simulation of networks of spiking neurons: A review of tools and strategies. J. Comput. Neurosci. 23(3): 349-398 (2007) - [j5]Abigail Morrison, Sirko Straube, Hans Ekkehard Plesser, Markus Diesmann:
Exact Subthreshold Integration with Continuous Spike Times in Discrete-Time Neural Network Simulations. Neural Comput. 19(1): 47-79 (2007) - [j4]Abigail Morrison, Ad Aertsen, Markus Diesmann:
Spike-Timing-Dependent Plasticity in Balanced Random Networks. Neural Comput. 19(6): 1437-1467 (2007) - [c2]Hans E. Plesser, Jochen M. Eppler, Abigail Morrison, Markus Diesmann, Marc-Oliver Gewaltig:
Efficient Parallel Simulation of Large-Scale Neuronal Networks on Clusters of Multiprocessor Computers. Euro-Par 2007: 672-681 - [c1]Jochen M. Eppler, Hans E. Plesser, Abigail Morrison, Markus Diesmann, Marc-Oliver Gewaltig:
Multithreaded and Distributed Simulation of Large Biological Neuronal Networks. PVM/MPI 2007: 391-392 - 2006
- [j3]Ruben Guerrero-Rivera, Abigail Morrison, Markus Diesmann, Tim C. Pearce:
Programmable Logic Construction Kits for Hyper-Real-Time Neuronal Modeling. Neural Comput. 18(11): 2651-2679 (2006) - 2005
- [b1]Abigail Rhodes-Morrison:
Spike-timing dependent plasticity in recurrent networks. University of Freiburg, 2005, pp. 1-157 - [j2]Abigail Morrison, Carsten Mehring, Theo Geisel, Ad Aertsen, Markus Diesmann:
Advancing the Boundaries of High-Connectivity Network Simulation with Distributed Computing. Neural Comput. 17(8): 1776-1801 (2005) - 2004
- [j1]Tom Tetzlaff, Abigail Morrison, Theo Geisel, Markus Diesmann:
Consequences of realistic network size on the stability of embedded synfire chains. Neurocomputing 58-60: 117-121 (2004)
Coauthor Index
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