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John A. Berger

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2000 – 2009

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2006
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  - journals/tcbb/BergerHMA06
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John A. Berger, Sampsa Hautaniemi, Sanjit K. Mitra, Jaakko Astola:
Jointly Analyzing Gene Expression and Copy Number Data in Breast Cancer Using Data Reduction Models. IEEE ACM Trans. Comput. Biol. Bioinform. 3(1): 2-16 (2006)
2004
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John A. Berger, Sampsa Hautaniemi, Anna-Kaarina Järvinen, Henrik Edgren, Sanjit K. Mitra, Jaakko Astola:
Optimized LOWESS normalization parameter selection for DNA microarray data. BMC Bioinform. 5: 194 (2004)
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John A. Berger, Sanjit K. Mitra, Marco Carli, Alessandro Neri:
Visualization and analysis of DNA sequences using DNA walks. J. Frankl. Inst. 341(1-2): 37-53 (2004)
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John A. Berger, Sampsa Hautaniemi, Sanjit K. Mitra:
Comparative Analysis of Gene Expression and DNA Copy Number Data for Pancreatic and Breast Cancers Using an Orthogonal Decomposition. CSB 2004: 584-585
2003
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John A. Berger, Sanjit K. Mitra, Jaakko Astola:
Power spectrum analysis for DNA sequences. ISSPA (2) 2003: 29-32
[c1]
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John A. Berger, Sampsa Hautaniemi, Henrik Edgren, Outi Monni, Sanjit K. Mitra, Olli Yli-Harja, Jaakko Astola:
Identifying underlying factors in breast cancer using independent component analysis. NNSP 2003: 81-90

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