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Zafer Aydin
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Books and Theses
- 2008
- [b1]Zafer Aydin:
Bayesian models and algoritms for protein secondary structure and beta-sheet prediction. Georgia Institute of Technology, Atlanta, GA, USA, 2008
Journal Articles
- 2024
- [j23]Sena Busra Yengec Tasdemir
, Zafer Aydin, Ebru Akay
An effective colorectal polyp classification for histopathological images based on supervised contrastive learning. Comput. Biol. Medicine 172: 108267 (2024) - [j22]Hilal Hacilar, Zafer Aydin, Vehbi Çagri Güngör:
Network intrusion detection based on machine learning strategies: performance comparisons on imbalanced wired, wireless, and software-defined networking (SDN) network traffics. Turkish J. Electr. Eng. Comput. Sci. 32(4): 623-640 (2024) - 2023
- [j21]Sena Busra Yengec Tasdemir
Improved classification of colorectal polyps on histopathological images with ensemble learning and stain normalization. Comput. Methods Programs Biomed. 232: 107441 (2023) - [j20]Yasin Görmez
IGPRED-MultiTask: A Deep Learning Model to Predict Protein Secondary Structure, Torsion Angles and Solvent Accessibility. IEEE ACM Trans. Comput. Biol. Bioinform. 20(2): 1104-1113 (2023) - 2022
- [j19]Yunus Emre Isik
The Determination of Distinctive Single Nucleotide Polymorphism Sets for the Diagnosis of Behçet's Disease. IEEE ACM Trans. Comput. Biol. Bioinform. 19(3): 1909-1918 (2022) - 2021
- [j18]Rukiye Nur Kaçmaz
Effect of interpolation on specular reflections in texture-based automatic colonic polyp detection. Int. J. Imaging Syst. Technol. 31(1): 327-335 (2021) - [j17]Solveig K. Sieberts
Crowdsourcing digital health measures to predict Parkinson's disease severity: the Parkinson's Disease Digital Biomarker DREAM Challenge. npj Digit. Medicine 4 (2021) - [j16]Mostafa Sabzekar
A noise-aware feature selection approach for classification. Soft Comput. 25(8): 6391-6400 (2021) - 2020
- [j15]Mustafa Bicakci
Metabolic Imaging Based Sub-Classification of Lung Cancer. IEEE Access 8: 218470-218476 (2020) - [j14]Oguzhan Ayyildiz, Zafer Aydin, Bülent Yilmaz
Lung cancer subtype differentiation from positron emission tomography images. Turkish J. Electr. Eng. Comput. Sci. 28(1): 262-274 (2020) - [j13]Yasin Gormez
A deep learning approach with Bayesian optimization and ensemble classifiers for detecting denial of service attacks. Int. J. Commun. Syst. 33(11) (2020) - [j12]Nuh Azginoglu
Structural profile matrices for predicting structural properties of proteins. J. Bioinform. Comput. Biol. 18(4): 2050022:1-2050022:20 (2020) - [j11]Sena Busra Yengec Tasdemir, Kasim Tasdemir
A review of mammographic region of interest classification. WIREs Data Mining Knowl. Discov. 10(5) (2020) - 2019
- [j10]Zafer Aydin
Developing structural profile matrices for protein secondary structure and solvent accessibility prediction. Bioinform. 35(20): 4004-4010 (2019) - 2018
- [j9]Zafer Aydin, Oguz Kaynar, Yasin Gormez
Dimensionality reduction for protein secondary structure and solvent accesibility prediction. J. Bioinform. Comput. Biol. 16(5): 1850020:1-1850020:16 (2018) - 2017
- [j8]Mostafa Sabzekar
Protein β-sheet prediction using an efficient dynamic programming algorithm. Comput. Biol. Chem. 70: 142-155 (2017) - 2015
- [j7]Cigdem Eroglu Erdem
BAUM-2: a multilingual audio-visual affective face database. Multim. Tools Appl. 74(18): 7429-7459 (2015) - 2011
- [j6]Zafer Aydin, Ajit P. Singh, Jeff A. Bilmes, William Stafford Noble:
Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure. BMC Bioinform. 12: 154 (2011) - [j5]Zafer Aydin, Yucel Altunbasak, Hakan Erdogan:
Bayesian Models and Algorithms for Protein β-Sheet Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. 8(2): 395-409 (2011) - 2010
- [j4]Zafer Aydin, John I. Murray, Robert H. Waterston, William Stafford Noble:
Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing C. elegans embryo. BMC Bioinform. 11: 84 (2010) - 2007
- [j3]Zafer Aydin, Yucel Altunbasak, Hakan Erdogan:
Bayesian Protein Secondary Structure Prediction With Near-Optimal Segmentations. IEEE Trans. Signal Process. 55(7-1): 3512-3525 (2007) - 2006
- [j2]Zafer Aydin, Yucel Altunbasak, Mark Borodovsky:
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models. BMC Bioinform. 7: 178 (2006) - [j1]Zafer Aydin, Yucel Altunbasak:
A signal processing application in genomic research: protein secondary structure prediction. IEEE Signal Process. Mag. 23(4): 128-131 (2006)
Conference and Workshop Papers
- 2021
- [c11]Ümit Yilmaz, Cengiz Gezer, Zafer Aydin, Vehbi Çagri Güngör:
Data Mining Techniques in Direct Marketing on Imbalanced Data using Tomek Link Combined with Random Under-sampling. ICISDM 2021: 67-73 - 2018
- [c10]Sena Busra Yengec Tasdemir, Kasim Tasdemir
ROI Detection in Mammogram Images Using Wavelet-Based Haralick and HOG Features. ICMLA 2018: 105-109 - [c9]Zafer Aydin, Oguz Kaynar, Yasin Gormez:
Comparison of NR and UniClust databases for protein secondary structure prediction. SIU 2018: 1-4 - [c8]Zafer Aydin, Oguz Kaynar, Yasin Gormez, Yunus Emre Isik:
Comparison of machine learning classifiers for protein secondary structure prediction. SIU 2018: 1-4 - 2015
- [c7]Zafer Aydin, David Baker, William Stafford Noble:
Constructing Structural Profiles for Protein Torsion Angle Prediction. BIOINFORMATICS 2015: 26-35 - [c6]Zafer Aydin, David Baker, William Stafford Noble:
Template Scoring Methods for Protein Torsion Angle Prediction. BIOSTEC (Selected Papers) 2015: 206-223 - 2013
- [c5]Cigdem Turan
A method for extraction of affective audio-visual facial clips from movies. SIU 2013: 1-4 - 2007
- [c4]Zafer Aydin, Hakan Erdogan, Yucel Altunbasak:
Protein Fold Recognition using Residue-Based Alignments of Sequence and Secondary Structure. ICASSP (1) 2007: 349-352 - 2005
- [c3]Zafer Aydin, Toygar Akgun
A modified stack decoder for protein secondary structure prediction. ICASSP (4) 2005: 737-740 - 2004
- [c2]Zafer Aydin, Yücel Altunbasak, Mark Borodovsky:
Protein secondary structure prediction with semi Markov HMMs. ICASSP (5) 2004: 577-580 - 2002
- [c1]Ahmet Kemal Özdemir, Zafer Aydin, Orhan Arikan:
A new approach to time-frequency localized signal design. ICASSP 2002: 1229-1232
Coauthor Index
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