Computer Methods and Programs in Biomedicine, Volume 220

Volume 220, June 2022

Section II: Biomedical signal and image processing methods

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  Ki Duk Kim, Kyungjin Cho, Mingyu Kim, Kyung Hwa Lee, Seungjun Lee, Sang Min Lee, Kyung Hee Lee, Namkug Kim:
  Enhancing deep learning based classifiers with inpainting anatomical side markers (L/R markers) for multi-center trials. 106705

Corrigenda

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  Mohd Usama, Belal Ahmad, Wenjing Xiao, Mohammod Shamim Hossain, Ghulam Muhammad:
  Corrigendum to self-attention based recurrent convolutional neural network for disease prediction using healthcare data. 106710

Section V: Others

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  Chollette C. Olisah, Lyndon N. Smith, Melvyn L. Smith:
  Diabetes mellitus prediction and diagnosis from a data preprocessing and machine learning perspective. 106773

Section III: Modelling & Simulation

• 
  Amanda Cigier, François Varray, Damien Garcia:
  SIMUS: An open-source simulator for medical ultrasound imaging. Part II: Comparison with four simulators. 106774

Section V: Others

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  Konstantinos G. Lyras, Jack Lee:
  Haemodynamic analysis using multiphase flow dynamics in tubular lesions. 106780
• 
  Bo Li, Junhua Zhang, Ruiqi Yang, Hongjian Li:
  FM-Net: Deep Learning Network for the Fundamental Matrix Estimation from Biplanar Radiographs. 106782

Section II: Biomedical signal and image processing methods

• 
  Ji Jin, Haiying Zhang, Xingguang Geng, Yitao Zhang, Tianchun Ye:
  The pulse waveform quantification method basing on contour and derivative. 106784

Section V: Others

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  Yao-Sian Huang, Ping-Ru Chou, Hsin-Ming Chen, Yeun-Chung Chang, Ruey-Feng Chang:
  One-stage pulmonary nodule detection using 3-D DCNN with feature fusion and attention mechanism in CT image. 106786

Section II: Biomedical signal and image processing methods

• 
  Tao Han, Danni Ai, Yining Wang, Yonglin Bian, Ruirui An, Jingfan Fan, Hong Song, Hongzhi Xie, Jian Yang:
  Recursive Centerline- and Direction-Aware Joint Learning Network with Ensemble Strategy for Vessel Segmentation in X-ray Angiography Images. 106787

Section V: Others

• 
  J. Bernard Heymann:
  The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage. 106799
• 
  Rita Marques, Danilo Andrade De Jesus, João Barbosa Breda, Jan Van Eijgen, Ingeborg Stalmans, Theo van Walsum, Stefan Klein, Pedro G. Vaz, Luisa Sánchez Brea:
  Automatic Segmentation of the Optic Nerve Head Region in Optical Coherence Tomography: A Methodological Review. 106801
• 
  Andrea Behanova, Ali Abdollahzadeh, Ilya Belevich, Eija Jokitalo, Alejandra Sierra, Jussi Tohka:
  gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy. 106802

Section II: Biomedical signal and image processing methods

• 
  Parwane P. Pagano, Edward J. Ciaccio, Hasan Garan:
  Separation of cardiogenic oscillations from airflow waveforms using singular spectrum analysis. 106803

Section III: Modelling & Simulation

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  Mallampalli Kapardi, Madhav Vinodh Pithapuram, Yashaswini Mandayam Rangayyan, Raghu Sesha Iyengar, Avinash Kumar Singh, Sirisha Sripada, Mohan Raghavan:
  In-silico neuro musculoskeletal model reproduces the movement types obtained by spinal micro stimulation. 106804
• 
  Albert Wei, Julie Wang, Jiacheng Liu, Monica L. H. Jones, Jingwen Hu:
  A parametric head geometry model accounting for variation among adolescent and young adult populations. 106805

Section V: Others

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  Caihong Zhao, Jinbao Li, Yahong Guo:
  SleepContextNet: A temporal context network for automatic sleep staging based single-channel EEG. 106806

Section IV: Classification and interpretation

• 
  Maria Cristina Bisi, Manuela Fabbri, Duccio Maria Cordelli, Rita Stagni:
  Gait performance in toddlers born preterm: A sensor based quantitative characterization. 106808

Section V: Others

• 
  Qing Yang, Siru Feng, Jian Song, Chang Cheng, Chendi Liang, Yu Wang:
  Computer-aided automatic planning and biomechanical analysis of a novel arc screw for pelvic fracture internal fixation. 106810

Section III: Modelling & Simulation

• 
  Qianwen Hou, Keyi Tao, Tianming Du, Hongge Wei, Honghui Zhang, Shiliang Chen, Youlian Pan, Aike Qiao:
  A computational analysis of potential aortic dilation induced by the hemodynamic effects of bicuspid aortic valve phenotypes. 106811
• 
  Kate Duquesne, Nele Nauwelaers, Peter Claes, Emmanuel Albert Audenaert:
  Principal polynomial shape analysis: A non-linear tool for statistical shape modeling. 106812
• 
  Aisa Rassoli, Nasser Fatouraee, Robert Guidoin, Ze Zhang, Saba Ravaghi:
  A comparative study of different tissue materials for bioprosthetic aortic valves using experimental assays and finite element analysis. 106813
• 
  Xiaoyin Li, Xiao Liu, Ye Liang, Xiaoyan Deng, Yubo Fan:
  Spatiotemporal changes of local hemodynamics and plaque components during atherosclerotic progression in rabbit. 106814

Section IV: Classification and interpretation

• 
  Noa Cahan, Edith M. Marom, Shelly Soffer, Yiftach Barash, Eli Konen, Eyal Klang, Hayit Greenspan:
  Weakly supervised attention model for RV strain classification from volumetric CTPA scans. 106815

Section III: Modelling & Simulation

• 
  Eugenio J. Sánchez-Muñoz, Enrique J. Berjano, Ana González-Suárez:
  Computer simulations of consecutive radiofrequency pulses applied at the same point during cardiac catheter ablation: Implications for lesion size and risk of overheating. 106817

Section II: Biomedical signal and image processing methods

• 
  Elina Thibeau-Sutre, Mauricio Diaz-Melo, Ravi Hassanaly, Alexandre Routier, Didier Dormont, Olivier Colliot, Ninon Burgos:
  ClinicaDL: An open-source deep learning software for reproducible neuroimaging processing. 106818

Section V: Others

• 
  James Cushway, Liam Murphy, J. Geoffrey Chase, Geoffrey M. Shaw, Thomas Desaive:
  Physiological trend analysis of a novel cardio-pulmonary model during a preload reduction manoeuvre. 106819

Section III: Modelling & Simulation

• 
  Aakash Soni, Sachin Kumar, Navin Kumar:
  Stochastic failure analysis of proximal femur using an isogeometric analysis based nonlocal gradient-enhanced damage model. 106820

Section II: Biomedical signal and image processing methods

• 
  Yucheng Song, Shengbing Ren, Yu Lu, Xianghua Fu, Kelvin Kian Loong Wong:
  Deep learning-based automatic segmentation of images in cardiac radiography: A promising challenge. 106821

Section VI: Diagnostics and Decision Support

• 
  Xinyu Zhang, Vincent C. S. Lee, Jia Rong, James C. Lee, Feng Liu:
  Deep convolutional neural networks in thyroid disease detection: A multi-classification comparison by ultrasonography and computed tomography. 106823
• 
  Giulia Varriano, Pasquale Guerriero, Antonella Santone, Francesco Mercaldo, Luca Brunese:
  Explainability of radiomics through formal methods. 106824
• 
  Hyeong Jun Lee, Young Woo Kim, Jun Hong Kim, Yong-Joon Lee, Jinseok Moon, Peter Jeong, Joonhee Jeong, Jung-Sun Kim, Joon Sang Lee:
  Optimization of FFR prediction algorithm for gray zone by hemodynamic features with synthetic model and biometric data. 106827

Section V: Others

• 
  André L. S. Meirelles, Tahsin M. Kurç, Joel H. Saltz, George Teodoro:
  Effective active learning in digital pathology: A case study in tumor infiltrating lymphocytes. 106828

Section II: Biomedical signal and image processing methods

• 
  Huajie Wen, Jian Zhao, Shaohua Xiang, Lin Lin, Chengjian Liu, Tao Wang, Lin An, Lixin Liang, Bingding Huang:
  Towards more efficient ophthalmic disease classification and lesion location via convolution transformer. 106832

Section III: Modelling & Simulation

• 
  Vasileios Apostolopoulos, Tomás Tomás, Petr Bohác, Petr Marcián, Michal Mahdal, Tomás Valousek, Pavel Janícek, Lubos Nachtnebl:
  Biomechanical analysis of all-polyethylene total knee arthroplasty on periprosthetic tibia using the finite element method. 106834
• 
  Nurhidayah Mohd Zainol, Nor Salwa Damanhuri, Nor Azlan Othman, Yeong Shiong Chiew, Mohd Basri Mat Nor, Zuraida Muhammad, J. Geoffrey Chase:
  Estimating the incidence of spontaneous breathing effort of mechanically ventilated patients using a non-linear auto regressive (NARX) model. 106835

Section V: Others

• 
  Amrit Panda, Ram Bilas Pachori, Naveen Kakkar, M. Joseph John, Neeta Devi Sinnappah-Kang:
  Screening chronic myeloid leukemia neutrophils using a novel 3-Dimensional Spectral Gradient Mapping algorithm on hyperspectral images. 106836
• 
  Eduardo Pérez-Valero, Miguel Angel Lopez-Gordo, Christian Morillas Gutiérrez, Ismael Carrera-Muñoz, Rosa M. Vílchez-Carrillo:
  A self-driven approach for multi-class discrimination in Alzheimer's disease based on wearable EEG. 106841