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BIOSTEC BIOINFORMATICS 2016: Rome, Italy
- James P. Gilbert, Haim Azhari, Hesham H. Ali, Carla Quintão, Jan Sliwa, Carolina Ruiz, Ana L. N. Fred, Hugo Gamboa:
Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies (BIOSTEC 2016) - Volume 3: BIOINFORMATICS, Rome, Italy, February 21-23, 2016. SciTePress 2016, ISBN 978-989-758-170-0
Papers
Full Papers
- Jan Kalina, Jaroslav Hlinka:
Highly Robust Classification: A Regularized Approach for Omics Data. 17-26 - Jieun Jeong, Mudit Gupta, Andrey Poleshko, Jonathan A. Epstein:
Combinatorial Identification of Broad Association Regions with ChIP-seq Data. 27-34 - Morihiro Hayashida, Hitoshi Koyano:
Integer Linear Programming Approach to Median and Center Strings for a Probability Distribution on a Set of Strings. 35-41 - Blaise Hanczar, Avner Bar-Hen:
Controlling the Cost of Prediction in using a Cascade of Reject Classifiers for Personalized Medicine. 42-50 - Mohammad Shafahi, Hayo Bart, Hamideh Afsarmanesh:
BioMed Xplorer - Exploring (Bio)Medical Knowledge using Linked Data. 51-62 - Agustina Razetti, Xavier Descombes, Caroline Medioni, Florence Besse:
Statistical Characterization, Modelling and Classification of Morphological Changes in imp Mutant Drosophila Gamma Neurons. 63-74 - Saad Mneimneh, Syed Ali Ahmed:
A Sampling Approach for Multiple RNA Interaction - Finding Sub-optimal Solutions Fast. 75-84 - Sebastian Vlaic, Robert Altwasser, Peter Kupfer, Carol L. Nilsson, Mark R. Emmett, Anke Meyer-Baese
, Reinhard Guthke:
Inference of Predictive Phospho-regulatory Networks from LC-MS/MS Phosphoproteomics Data. 85-91 - Sean West
On the Impact of Granularity in Extracting Knowledge from Bioinformatics Data. 92-103
Short Papers
- Kübra Narci, Hasan Ogul, Mahinur S. Akkaya:
Sequence-based MicroRNA Clustering. 107-116 - Valentina Pugacheva, Alexander Korotkov, Eugene V. Korotkov:
Search for Latent Periodicity in Amino Acid Sequences with Insertions and Deletions. 117-127 - Hiroshi Noborio, Takahiro Kunii, Kiminori Mizushino:
Comparison of GPU-based and CPU-based Algorithms for Determining the Minimum Distance between a CUSA Scalper and Blood Vessels. 128-136 - Teppo Annila, Ramakanth Neeli-Venkata, Andre S. Ribeiro:
Robustness to Sub-optimal Temperatures of the Processes of Tsr Cluster Formation and Positioning in Escherichia Coli. 137-141 - Sidney K. Chu, Samuel Guanglin Xu, Feng Xu, Nelson L. S. Tang:
Gene-gene Interaction Analysis by IAC (Interaction Analysis by Chi-Square) - A Novel Biological Constraint-based Interaction Analysis Framework. 142-150 - Sohei Ito:
Temporal Logic based Framework to Model and Analyse Gene Networks with Alternative Splicing. 151-158 - Keiko Sato, Toshihide Hara, Masanori Ohya:
A Coding Theoretical Approach to Predict Sequence Changes in H5N1 Influenza A Virus Hemagglutinin. 159-167 - Zoya Khalid, Ugur Sezerman
ZK Drugresist - Automatic Extraction of Drug Resistance Mutations and Expression Level Changes from Medline Abstracts. 168-173 - Wataru Torii, Shinpei Fujimoto, Masahiro Furukawa
Techniques to Control Robot Action Consisting of Multiple Segmented Motions using Recurrent Neural Network with Butterfly Structure. 174-181 - Fabio Fassetti, Claudia Giallombardo, Ofelia Leone, Luigi Palopoli, Simona E. Rombo, Adolfo Saiardi
Discovering New Proteins in Plant Mitochondria by RNA Editing Simulation. 182-189 - Vinh Quoc Dang, Chiou Peng Lam:
Gene Selection using a Hybrid Memetic and Nearest Shrunken Centroid Algorithm. 190-197 - François Andry, Nevenka Dimitrova, Alexander Mankovich, Vartika Agrawal, Anas Bder, Ariel David:
PAPAyA: A Highly Scalable Cloud-based Framework for Genomic Processing. 198-206 - Fernanda Brito Correia, Joel P. Arrais, José Luís Oliveira:
Prediction of Cancer using Network Topological Features. 207-215 - Malik Yousef, Jens Allmer
Feature Selection for MicroRNA Target Prediction - Comparison of One-Class Feature Selection Methodologies. 216-225 - Karla Esmeralda Vazquez Ortiz, Jean-Michel Richer, David Lesaint:
Strategies for Phylogenetic Reconstruction - For the Maximum Parsimony Problem. 226-236 - Hafeez Ur Rehman, Usman Zafar, Alfredo Benso, Naveed Islam
A Structure based Approach for Accurate Prediction of Protein Interactions Networks. 237-244 - Nic Herndon
Ab initio Splice Site Prediction with Simple Domain Adaptation Classifiers. 245-252 - Hakan Gündüz
An Extension to Local Network Alignment using Hidden Markov Models (HMMs). 253-257 - Fei He, Akiyoshi Hanai, Hiroshi Nagamochi, Tatsuya Akutsu
Enumerating Naphthalene Isomers of Tree-like Chemical Graphs. 258-265 - Yuki Endo, Fubito Toyama, Chikafumi Chiba, Hiroshi Mori, Kenji Shoji:
Memory Efficient de novo Assembly Algorithm using Disk Streaming of K-mers. 266-271 - Anna Kuosmanen
On using Longer RNA-seq Reads to Improve Transcript Prediction Accuracy. 272-277 - Malgorzata Kardynska, Jaroslaw Smieja, Anna Naumowicz, Patryk Janus, Piotr Widlak, Marek Kimmel:
Sloppy/Stiff Parameters Rankings in Sensitivity Analysis of Signaling Pathways. 278-283 - José Fabián Reyes Román
Use of GeIS for Early Diagnosis of Alcohol Sensitivity. 284-289 - Abdoulaye Sarr, Petra Miglierini, Alexandra Fronville, Vincent Rodin:
Directional Cellular Dynamics for Tissue Morphogenesis and Tumour Characterization by Aggressive Cancer Cells Identification. 290-295
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