Clostridioides difficile LuxS mediates inter-bacterial interactions within biofilms (Q91754438)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

title

Clostridioides difficile LuxS mediates inter-bacterial interactions within biofilms (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

main subject

Clostridium difficile

object named as

Clostridioides difficile

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

Ross T Slater

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

Lucy R Frost

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

Andrew D Millard

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

Meera Unnikrishnan

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

publication date

9 July 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

page(s)

9903

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

24 April 2020

DESeq2

object named as

DESeq2

R package DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

0 references

cites work

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23 February 2021

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23 February 2021

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PHASTER: a better, faster version of the PHAST phage search tool

23 February 2021

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The Quorum Sensing Inhibitor Hamamelitannin Increases Antibiotic Susceptibility of Staphylococcus aureus Biofilms by Affecting Peptidoglycan Biosynthesis and eDNA Release

23 February 2021

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BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

23 February 2021

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Regulation of Clostridium difficile Spore Formation by the SpoIIQ and SpoIIIA Proteins

23 February 2021

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Manipulation of the quorum sensing signal AI-2 affects the antibiotic-treated gut microbiota

23 February 2021

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Burden of Clostridium difficile infection in the United States

23 February 2021

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Phage-mediated dispersal of biofilm and distribution of bacterial virulence genes is induced by quorum sensing

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

23 February 2021

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Global transcriptional response of Clostridium difficile carrying the CD38 prophage

23 February 2021

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Gut microbiota-produced succinate promotes C. difficile infection after antibiotic treatment or motility disturbance

23 February 2021

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Underdiagnosis of Clostridium difficile across Europe: the European, multicentre, prospective, biannual, point-prevalence study of Clostridium difficile infection in hospitalised patients with diarrhoea (EUCLID).

23 February 2021

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Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Members of the human gut microbiota involved in recovery from Vibrio cholerae infection

23 February 2021

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Nutritional iron turned inside out: intestinal stress from a gut microbial perspective

23 February 2021

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23 February 2021

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Flagella-mediated adhesion and extracellular DNA release contribute to biofilm formation and stress tolerance of Campylobacter jejuni

23 February 2021

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Recovery of the gut microbiome following fecal microbiota transplantation

23 February 2021

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Microbiome data distinguish patients with Clostridium difficile infection and non-C. difficile-associated diarrhea from healthy controls

23 February 2021

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Biofilm dispersion and quorum sensing

23 February 2021

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23 February 2021

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Role of the intestinal microbiota in resistance to colonization by Clostridium difficile

23 February 2021

1 reference

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Spore formation and toxin production in Clostridium difficile biofilms

23 February 2021

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Lipoprotein CD0873 is a novel adhesin of Clostridium difficile

23 February 2021

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Surface-layer protein A (SlpA) is a major contributor to host-cell adherence of Clostridium difficile

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

The correlation between Clostridium-difficile infection and human gut concentrations of Bacteroidetes phylum and clostridial species

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

LuxS affects biofilm maturation and detachment of the periodontopathogenic bacterium Eikenella corrodens

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

High-throughput DNA sequence analysis reveals stable engraftment of gut microbiota following transplantation of previously frozen fecal bacteria

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Characterisation of Clostridium difficile biofilm formation, a role for Spo0A.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Multiple factors modulate biofilm formation by the anaerobic pathogen Clostridium difficile

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Time course analysis of Candida albicans metabolites during biofilm development

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Quorum sensing and bacterial social interactions in biofilms

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Diverse temperate bacteriophage carriage in Clostridium difficile 027 strains

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

PHAST: a fast phage search tool

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Role of fibronectin-binding protein A in Clostridium difficile intestinal colonization.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Comparative metagenomic study of alterations to the intestinal microbiota and risk of nosocomial Clostridum difficile-associated disease

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

The role of toxin A and toxin B in Clostridium difficile infection

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Quorum sensing affects biofilm formation through lipopolysaccharide synthesis in Klebsiella pneumoniae

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Quorum sensing in bacterial virulence

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Fast and accurate long-read alignment with Burrows-Wheeler transform

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium

23 February 2021

1 reference

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Clostridium difficile infection: new developments in epidemiology and pathogenesis

23 February 2021

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Toxin B is essential for virulence of Clostridium difficile

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Health care-associated Clostridium difficile infection in adults admitted to acute care hospitals in Canada: a Canadian Nosocomial Infection Surveillance Program Study

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

luxS-based quorum-sensing signaling affects Biofilm formation in Streptococcus mutans.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Lack of genomic evidence of AI-2 receptors suggests a non-quorum sensing role for luxS in most bacteria

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Establishing bacterial communities by 'word of mouth': LuxS and autoinducer 2 in biofilm development

23 February 2021

1 reference

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Bile salts and glycine as cogerminants for Clostridium difficile spores

23 February 2021

1 reference

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Quorum-sensing regulation of the biofilm matrix genes (pel) of Pseudomonas aeruginosa.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

The cidA murein hydrolase regulator contributes to DNA release and biofilm development in Staphylococcus aureus.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Bacteroides species produce Vibrio harveyi autoinducer 2-related molecules.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Autoinducer 2 affects biofilm formation by Bacillus cereus

23 February 2021

1 reference

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LuxS/autoinducer-2 quorum sensing molecule regulates transcriptional virulence gene expression in Clostridium difficile.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Making 'sense' of metabolism: autoinducer-2, LuxS and pathogenic bacteria.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Clostridium difficile toxins: mechanism of action and role in disease

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Quorum sensing in Clostridium difficile: analysis of a luxS-type signalling system.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Determinants of freeze tolerance in microorganisms, physiological importance, and biotechnological applications

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Interspecies communication in bacteria

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Quorum Sensing-Dependent Biofilms Enhance Colonization in Vibrio cholerae

23 February 2021

1 reference

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Bacterial iron homeostasis

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Carbon catabolite repression in bacteria: choice of the carbon source and autoregulatory limitation of sugar utilization

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Changes in predominant bacterial populations in human faeces with age and with Clostridium difficile infection

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Role of FliC and FliD flagellar proteins of Clostridium difficile in adherence and gut colonization

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Characterization of a cell surface protein of Clostridium difficile with adhesive properties

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Epidemiology of recurrences or reinfections of Clostridium difficile-associated diarrhea.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

KEGG: kyoto encyclopedia of genes and genomes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Cross-species induction of luminescence in the quorum-sensing bacterium Vibrio harveyi

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Intercellular signalling in Vibrio harveyi: sequence and function of genes regulating expression of luminescence.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Ferric citrate transport in Escherichia coli requires outer membrane receptor protein fecA

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

Pathway of Succinate and Propionate Formation in Bacteroides fragilis

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6616478

10.1038/S41598-019-46143-6

23 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json

24 April 2020

PubMed publication ID

31289293

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31289293%20AND%20SRC:MED&resulttype=core&format=json