Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy (Q90440370)

From Wikidata

Jump to navigation Jump to search

scientific article published on 02 October 2019

edit

Language	Label	Description	Also known as
English	Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy	scientific article published on 02 October 2019

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

title

Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

main subject

bacteriophage

1 reference

based on heuristic

inferred from title

corrigendum / erratum

Correction for Huet et al., Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy

0 references

author

Robert L. Duda

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

James F. Conway

series ordinal

4

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

Alexis Huet

series ordinal

1

object named as

Alexis Huet

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

Pascale Boulanger

series ordinal

3

object named as

Pascale Boulanger

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

publication date

2 October 2019

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

published in

Proceedings of the National Academy of Sciences of the United States of America

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

volume

116

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

issue

42

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

page(s)

21037-21046

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

cites work

Proteolytic and conformational control of virus capsid maturation: the bacteriophage HK97 system

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cation-pi interactions in structural biology

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Topologically linked protein rings in the bacteriophage HK97 capsid

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physical Principles in the Construction of Regular Viruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The refined structure of a protein catenane: the HK97 bacteriophage capsid at 3.44 A resolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

UCSF Chimera--a visualization system for exploratory research and analysis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Common ancestry of herpesviruses and tailed DNA bacteriophages

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacteriophage T5 structure reveals similarities with HK97 and T4 suggesting evolutionary relationships

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacteriophage lambda stabilization by auxiliary protein gpD: timing, location, and mechanism of attachment determined by cryo-EM.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An improved cryogen for plunge freezing

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis of enzyme encapsulation into a bacterial nanocompartment

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An unexpected twist in viral capsid maturation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and energetics of encapsidated DNA in bacteriophage HK97 studied by scanning calorimetry and cryo-electron microscopy

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The bacteriophage genome undergoes a succession of intracapsid phase transitions upon DNA ejection

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

P22 Coat Protein Structures Reveal a Novel Mechanism for Capsid Maturation: Stability without Auxiliary Proteins or Chemical Crosslinks

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Features and development of Coot

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Applications of the molecular dynamics flexible fitting method

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Outcome of the first electron microscopy validation task force meeting

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Capsomer dynamics and stabilization in the T = 12 marine bacteriophage SIO-2 and its procapsid studied by CryoEM

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and size determination of bacteriophage P2 and P4 procapsids: function of size responsiveness mutations

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A two-state cooperative expansion converts the procapsid shell of bacteriophage T5 into a highly stable capsid isomorphous to the final virion head

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transient contacts on the exterior of the HK97 procapsid that are essential for capsid assembly.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Capsid expansion mechanism of bacteriophage T7 revealed by multistate atomic models derived from cryo-EM reconstructions

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Phyre2 web portal for protein modeling, prediction and analysis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Subassemblies and asymmetry in assembly of herpes simplex virus procapsid

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correct Assembly of the Bacteriophage T5 Procapsid Requires Both the Maturation Protease and the Portal Complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extensive subunit contacts underpin herpesvirus capsid stability and interior-to-exterior allostery.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accurate design of megadalton-scale two-component icosahedral protein complexes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accurate model annotation of a near-atomic resolution cryo-EM map.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of a headful DNA-packaging bacterial virus at 2.9 Å resolution by electron cryo-microscopy

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cryo-EM structure of the bacteriophage T4 isometric head at 3.3-Å resolution and its relevance to the assembly of icosahedral viruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Competing scaffolding proteins determine capsid size during mobilization of Staphylococcus aureus pathogenicity islands

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Capsids and Genomes of Jumbo-Sized Bacteriophages Reveal the Evolutionary Reach of the HK97 Fold.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80α and SaPI1 Capsids

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cryo-EM structure of a herpesvirus capsid at 3.1 Å.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the herpes simplex virus 1 capsid with associated tegument protein complexes.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Real-space refinement in PHENIX for cryo-EM and crystallography

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The amazing HK97 fold: versatile results of modest differences

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31578255

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.1909645116

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

PMC publication ID

6800373

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

PubMed publication ID

31578255

1 reference

stated in

Europe PubMed Central

PMC publication ID

6800373

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31578255%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q90440370&oldid=2113238555"