Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens (Q80335717)

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scientific article published on 22 September 2006

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English	Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens	scientific article published on 22 September 2006

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scholarly article

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30 December 2019

Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens (English)

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30 December 2019

Arabidopsis thaliana

1 reference

based on heuristic

inferred from title

lignin biosynthetic process

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based on heuristic

inferred from title

Thlaspi caerulescens

object named as

Thlaspi caerulescens

1 reference

based on heuristic

inferred from title

Hyperaccumulator

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inferred from title

Perry D. Moerland

6

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30 December 2019

Maarten Koornneef

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30 December 2019

author name string

Judith E van de Mortel

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30 December 2019

Laia Almar Villanueva

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30 December 2019

Henk Schat

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30 December 2019

Jeroen Kwekkeboom

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30 December 2019

Sean Coughlan

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30 December 2019

Emiel Ver Loren van Themaat

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30 December 2019

Mark G M Aarts

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30 December 2019

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22 September 2006

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30 December 2019

Plant Physiology

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30 December 2019

142

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30 December 2019

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30 December 2019

1127-1147

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30 December 2019

A ferric-chelate reductase for iron uptake from soils

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Overexpression of a novel Arabidopsis gene related to putative zinc-transporter genes from animals can lead to enhanced zinc resistance and accumulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Map-based cloning of chloronerva, a gene involved in iron uptake of higher plants encoding nicotianamine synthase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zeroing in on zinc uptake in yeast and plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The SPOROCYTELESS gene of Arabidopsis is required for initiation of sporogenesis and encodes a novel nuclear protein.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

INNER NO OUTER regulates abaxial- adaxial patterning in Arabidopsis ovules

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The molecular physiology of heavy metal transport in the Zn/Cd hyperaccumulator Thlaspi caerulescens

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cadmium and iron transport by members of a plant metal transporter family in Arabidopsis with homology to Nramp genes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maize yellow stripe1 encodes a membrane protein directly involved in Fe(III) uptake

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional activity and role of cation-efflux family members in Ni hyperaccumulation in Thlaspi goesingense

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular mechanisms of plant metal tolerance and homeostasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Influence of iron status on cadmium and zinc uptake by different ecotypes of the hyperaccumulator Thlaspi caerulescens

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced ATP-dependent copper efflux across the root cell plasma membrane in copper-tolerant Silene vulgaris

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A long way ahead: understanding and engineering plant metal accumulation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Design issues for cDNA microarray experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Significance of the expression of the CER6 condensing enzyme for cuticular wax production in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiological Characterization of Root Zn2+ Absorption and Translocation to Shoots in Zn Hyperaccumulator and Nonaccumulator Species of Thlaspi.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant defensins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of nicotianamine in the intracellular delivery of metals and plant reproductive development

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AtNRAMP3, a multispecific vacuolar metal transporter involved in plant responses to iron deficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression profiles of Arabidopsis thaliana in mineral deficiencies reveal novel transporters involved in metal homeostasis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cross-species microarray transcript profiling reveals high constitutive expression of metal homeostasis genes in shoots of the zinc hyperaccumulator Arabidopsis halleri

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative microarray analysis of Arabidopsis thaliana and Arabidopsis halleri roots identifies nicotianamine synthase, a ZIP transporter and other genes as potential metal hyperaccumulation factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AtHMA3, a plant P1B-ATPase, functions as a Cd/Pb transporter in yeast.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

P-type ATPase heavy metal transporters with roles in essential zinc homeostasis in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The plant CDF family member TgMTP1 from the Ni/Zn hyperaccumulator Thlaspi goesingense acts to enhance efflux of Zn at the plasma membrane when expressed in Saccharomyces cerevisiae.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis Yellow Stripe-Like2 (YSL2): a metal-regulated gene encoding a plasma membrane transporter of nicotianamine-metal complexes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two genes encoding Arabidopsis halleri MTP1 metal transport proteins co-segregate with zinc tolerance and account for high MTP1 transcript levels

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Over-expression of an Arabidopsis zinc transporter in hordeum vulgare increases short-term zinc uptake after zinc deprivation and seed zinc content

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The use of MPSS for whole-genome transcriptional analysis in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

FRD3 controls iron localization in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The potassium-dependent transcriptome of Arabidopsis reveals a prominent role of jasmonic acid in nutrient signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis HMA2, a divalent heavy metal-transporting P(IB)-type ATPase, is involved in cytoplasmic Zn2+ homeostasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of Thlaspi caerulescens genes that may be involved in heavy metal hyperaccumulation and tolerance. Characterization of a novel heavy metal transporting ATPase

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for copper homeostasis function of metallothionein (MT3) in the hyperaccumulator Thlaspi caerulescens

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The essential basic helix-loop-helix protein FIT1 is required for the iron deficiency response

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Arabidopsis metallothioneins 2a and 3 enhance resistance to cadmium when expressed in Vicia faba guard cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zinc transporter of Arabidopsis thaliana AtMTP1 is localized to vacuolar membranes and implicated in zinc homeostasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A putative function for the arabidopsis Fe-Phytosiderophore transporter homolog AtYSL2 in Fe and Zn homeostasis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Profiling candidate genes involved in wax biosynthesis in Arabidopsis thaliana by microarray analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular and biochemical characterization of the Fe(III) chelate reductase gene family in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increased nicotianamine biosynthesis confers enhanced tolerance of high levels of metals, in particular nickel, to plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nicotianamine over-accumulation confers resistance to nickel in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mobilization of vacuolar iron by AtNRAMP3 and AtNRAMP4 is essential for seed germination on low iron.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression profiling of the Arabidopsis ferric chelate reductase (FRO) gene family reveals differential regulation by iron and copper

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The level of jasmonic acid in Arabidopsis thaliana and Phaseolus coccineus plants under heavy metal stress.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comparison of the Thlaspi caerulescens and Thlaspi arvense shoot transcriptomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The heavy metal hyperaccumulator Thlaspi caerulescens expresses many species-specific genes, as identified by comparative expressed sequence tag analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A putative novel role for plant defensins: a defensin from the zinc hyper-accumulating plant, Arabidopsis halleri, confers zinc tolerance

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations in Arabidopsis yellow stripe-like1 and yellow stripe-like3 reveal their roles in metal ion homeostasis and loading of metal ions in seeds

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Zinc-dependent global transcriptional control, transcriptional deregulation, and higher gene copy number for genes in metal homeostasis of the hyperaccumulator Arabidopsis halleri.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

IDENTICAL MAJOR GENE LOCI FOR HEAVY METAL TOLERANCES THAT HAVE INDEPENDENTLY EVOLVED IN DIFFERENT LOCAL POPULATIONS AND SUBSPECIES OF SILENE VULGARIS.

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure, organization and expression of the metallothionein gene family in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CER3 gene of Arabidopsis thaliana is expressed in leaves, stems, roots, flowers and apical meristems

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a family of zinc transporter genes from Arabidopsis that respond to zinc deficiency

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Concomitant activation of jasmonate and ethylene response pathways is required for induction of a plant defensin gene in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cluster analysis and display of genome-wide expression patterns

1 reference

https://pubmed.ncbi.nlm.nih.gov/16998091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.106.082073

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16998091%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16998091%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

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