All-atom MD indicates ion-dependent behavior of therapeutic DNA polymer (Q62763957)

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English	All-atom MD indicates ion-dependent behavior of therapeutic DNA polymer	article

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

title

All-atom MD indicates ion-dependent behavior of therapeutic DNA polymer (English)

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

author

Freddie R Salsbury

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3

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5600158

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27 March 2020

author name string

Ryan L Melvin

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1

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

William H Gmeiner

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2

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5600158

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27 March 2020

language of work or name

English

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publication date

1 August 2017

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Europe PubMed Central

PMC publication ID

5600158

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27 March 2020

published in

Physical Chemistry Chemical Physics

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

volume

19

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

issue

33

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Europe PubMed Central

PMC publication ID

5600158

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

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27 March 2020

page(s)

22363-22374

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5600158

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27 March 2020

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Cooperative stabilization of Zn(2+):DNA complexes through netropsin binding in the minor groove of FdU-substituted DNA.

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3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures

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Zinc-nucleic acid interaction

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The Stability of a Model Substrate for Topoisomerase 1-Mediated DNA Religation Depends on the Presence of Mismatched Base Pairs

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Laser-induced lanthanide ion laminescence lifetime measurements by direct excitation of metal ion levels. A new class of structural probe for calcium-binding proteins and nucleic acids

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DNA structure: cations in charge?

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Uncovering Large-Scale Conformational Change in Molecular Dynamics without Prior Knowledge

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A magnesium ion core at the heart of a ribozyme domain

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Cytotoxicity and in-vivo tolerance of FdUMP[10]: a novel pro-drug of the TS inhibitory nucleotide FdUMP.

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RNA switches function

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3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures

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Visualizing ensembles in structural biology

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Ribonucleinase; the behavior of copper and calcium in the purification of nucleic acid and the effect of these and other reagents on the activity of ribonucleinase

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5-Fluorouracil: mechanisms of action and clinical strategies

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Simulating Monovalent and Divalent Ions in Aqueous Solution Using a Drude Polarizable Force Field.

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Calcium ions effectively enhance the effect of antisense peptide nucleic acids conjugated to cationic tat and oligoarginine peptides

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Increased cytotoxicity and decreased in vivo toxicity of FdUMP[10] relative to 5-FU

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Conformational transitions of duplex and triplex nucleic acid helices: thermodynamic analysis of effects of salt concentration on stability using preferential interaction coefficients

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All-Atom Molecular Dynamics Reveals Mechanism of Zinc Complexation with Therapeutic F10.

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Metal ions and RNA folding: a highly charged topic with a dynamic future

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Identifiers

DOI

10.1039/C7CP03479B

1 reference

stated in

Europe PubMed Central

PMC publication ID

5600158

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

PMC publication ID

5600158

1 reference

stated in

Europe PubMed Central

PMC publication ID

5600158

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

PubMed publication ID

28805211

1 reference

stated in

Europe PubMed Central

PMC publication ID

5600158

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28805211%20AND%20SRC:MED&resulttype=core&format=json

retrieved

27 March 2020

 

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