Recent Progress on the Molecular Mechanism of Quality Controls Induced by Ribosome Stalling (Q61814275)

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scientific article published on 01 January 2018

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English	Recent Progress on the Molecular Mechanism of Quality Controls Induced by Ribosome Stalling	scientific article published on 01 January 2018

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scholarly article

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Europe PubMed Central

PMC publication ID

6344382

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

title

Recent Progress on the Molecular Mechanism of Quality Controls Induced by Ribosome Stalling (English)

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stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

main subject

ribosome

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molecular medicine

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author

Ken Ikeuchi

series ordinal

1

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Europe PubMed Central

PMC publication ID

6344382

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

author name string

Toshiaki Izawa

series ordinal

2

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Europe PubMed Central

PMC publication ID

6344382

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

Toshifumi Inada

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3

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stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

language of work or name

English

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publication date

1 January 2018

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Europe PubMed Central

PMC publication ID

6344382

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

published in

Frontiers in Genetics

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stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

volume

9

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Europe PubMed Central

PMC publication ID

6344382

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

page(s)

743

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Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

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21 April 2020

copyright license

Creative Commons Attribution 4.0 International

start time

17 January 2019

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April 2022 Public Data File from Crossref

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copyrighted

0 references

cites work

Exosome-mediated recognition and degradation of mRNAs lacking a termination codon

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

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inferred from PubMed ID database lookup

Novel transcription coactivator complex containing activating signal cointegrator 1

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A late-acting quality control process for mature eukaryotic rRNAs

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

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inferred from PubMed ID database lookup

A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

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inferred from PubMed ID database lookup

A mouse forward genetics screen identifies LISTERIN as an E3 ubiquitin ligase involved in neurodegeneration

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of Dom34 and its function in no-go decay

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of a ribosome-associated E3 ubiquitin ligase in protein quality control

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the Dom34-Hbs1 complex and implications for no-go decay

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Receptor for activated C kinase 1 stimulates nascent polypeptide-dependent translation arrest

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dom34:hbs1 plays a general role in quality-control systems by dissociation of a stalled ribosome at the 3' end of aberrant mRNA.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel E3 ubiquitin ligases that regulate histone protein levels in the budding yeast Saccharomyces cerevisiae.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Listerin-dependent nascent protein ubiquitination relies on ribosome subunit dissociation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translation of CGA codon repeats in yeast involves quality control components and ribosomal protein L1.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein quality control systems associated with no-go and nonstop mRNA surveillance in yeast

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dom34 rescues ribosomes in 3' untranslated regions

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA function. Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reconstitution of a minimal ribosome-associated ubiquitination pathway with purified factors

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis for translational surveillance by the large ribosomal subunit-associated protein quality control complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An active role for the ribosome in determining the fate of oxidized mRNA

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein synthesis. Rqc2p and 60S ribosomal subunits mediate mRNA-independent elongation of nascent chains

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and assembly pathway of the ribosome quality control complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

K63 polyubiquitination is a new modulator of the oxidative stress response

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inhibiting K63 polyubiquitination abolishes no-go type stalled translation surveillance in Saccharomyces cerevisiae

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global analysis of RNA cleavage by 5'-hydroxyl RNA sequencing.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Target Selection during Protein Quality Control

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome-associated protein quality control

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Failure of RQC machinery causes protein aggregation and proteotoxic stress.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Rqc2/Tae2 subunit of the ribosome-associated quality control (RQC) complex marks ribosome-stalled nascent polypeptide chains for aggregation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rqc1 and Ltn1 Prevent C-terminal Alanine-Threonine Tail (CAT-tail)-induced Protein Aggregation by Efficient Recruitment of Cdc48 on Stalled 60S Subunits

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome-associated Asc1/RACK1 is required for endonucleolytic cleavage induced by stalled ribosome at the 3' end of nonstop mRNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adjacent Codons Act in Concert to Modulate Translation Efficiency in Yeast

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ZNF598 and RACK1 Regulate Mammalian Ribosome-Associated Quality Control Function by Mediating Regulatory 40S Ribosomal Ubiquitylation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Asc1, Hel2, and Slh1 couple translation arrest to nascent chain degradation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The E3 ubiquitin ligase and RNA-binding protein ZNF598 orchestrates ribosome quality control of premature polyadenylated mRNAs

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CAT-tailing as a fail-safe mechanism for efficient degradation of stalled nascent polypeptides

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ubiquitination of stalled ribosome triggers ribosome-associated quality control

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosome Collision Is Critical for Quality Control during No-Go Decay

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulated Ire1-dependent mRNA decay requires no-go mRNA degradation to maintain endoplasmic reticulum homeostasis in S. pombe.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytosolic Protein Vms1 Links Ribosome Quality Control to Mitochondrial and Cellular Homeostasis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A ubiquitin-dependent signalling axis specific for ALKBH-mediated DNA dealkylation repair.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribothrypsis, a novel process of canonical mRNA decay, mediates ribosome-phased mRNA endonucleolysis.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vms1 and ANKZF1 peptidyl-tRNA hydrolases release nascent chains from stalled ribosomes.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vms1p is a release factor for the ribosome-associated quality control complex.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The No-go decay system degrades plant mRNAs that contain a long A-stretch in the coding region

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Release of Ubiquitinated and Non-ubiquitinated Nascent Chains from Stalled Mammalian Ribosomal Complexes by ANKZF1 and Ptrh1

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ZNF598 Is a Quality Control Sensor of Collided Ribosomes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30705686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.3389/FGENE.2018.00743

1 reference

stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

PMC publication ID

6344382

1 reference

stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

PubMed publication ID

30705686

1 reference

stated in

Europe PubMed Central

PMC publication ID

6344382

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30705686%20AND%20SRC:MED&resulttype=core&format=json

retrieved

21 April 2020

 

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