CG dinucleotide periodicities recognized by the Dnmt3a-Dnmt3L complex are distinctive at retroelements and imprinted domains. (Q53489905)

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English	CG dinucleotide periodicities recognized by the Dnmt3a-Dnmt3L complex are distinctive at retroelements and imprinted domains.	scientific article

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

title

CG dinucleotide periodicities recognized by the Dnmt3a-Dnmt3L complex are distinctive at retroelements and imprinted domains. (English)

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PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

author

John Greally

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4

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19921333

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http://europepmc.org/abstract/MED/19921333

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Jacob L Glass

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1

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PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

Melissa J Fazzari

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2

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PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

Anne C Ferguson-Smith

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3

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

publication date

1 September 2009

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PubMed publication ID

19921333

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http://europepmc.org/abstract/MED/19921333

number of pages

11

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Mammalian Genome

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

volume

20

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

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http://europepmc.org/abstract/MED/19921333

issue

9-10

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

reference URL

http://europepmc.org/abstract/MED/19921333

page(s)

633-643

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Europe PubMed Central

PubMed publication ID

19921333

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14 May 2018

reference URL

http://europepmc.org/abstract/MED/19921333

cites work

A novel approach for identifying candidate imprinted genes through sequence analysis of imprinted and control genes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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CpG methylation is targeted to transcription units in an invertebrate genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse.

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https://pubmed.ncbi.nlm.nih.gov/19921333

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DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG.

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Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L

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Cytosine methylation and the ecology of intragenomic parasites

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CpG mutation rates in the human genome are highly dependent on local GC content

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Alu repeated DNAs are differentially methylated in primate germ cells

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Epigenomics: beyond CpG islands.

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CpG island mapping by epigenome prediction

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PubMed

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Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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Dnmt3L and the establishment of maternal genomic imprints

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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inferred from PubMed ID database lookup

CpNpG methylation in mammalian cells

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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inferred from PubMed ID database lookup

Coordinate regulation of DNA methyltransferase expression during oogenesis

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https://pubmed.ncbi.nlm.nih.gov/19921333

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B1 and related SINEs in mammalian genomes.

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12 December 2020

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Maintenance DNA methylation of nucleosome core particles.

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters

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Evolutionary history of 7SL RNA-derived SINEs in Supraprimates

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Origin and diversification of minisatellites derived from human Alu sequences

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Meiotic and epigenetic defects in Dnmt3L-knockout mouse spermatogenesis.

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Comparative isoschizomer profiling of cytosine methylation: the HELP assay

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12 December 2020

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Short interspersed transposable elements (SINEs) are excluded from imprinted regions in the human genome

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12 December 2020

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Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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CpG islands in vertebrate genomes

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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Mutagenic deamination of cytosine residues in DNA

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Large-scale analysis of the Alu Ya5 and Yb8 subfamilies and their contribution to human genomic diversity

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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Mechanisms regulating imprinted genes in clusters.

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12 December 2020

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Comprehensive analysis of CpG islands in human chromosomes 21 and 22

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

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Perceptive enzymes

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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The distinguishing sequence characteristics of mouse imprinted genes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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inferred from PubMed ID database lookup

Genome-wide prediction of imprinted murine genes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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CG dinucleotide clustering is a species-specific property of the genome

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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inferred from PubMed ID database lookup

Dynamic regulation of nucleosome positioning in the human genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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inferred from PubMed ID database lookup

CpG island methylation in human lymphocytes is highly correlated with DNA sequence, repeats, and predicted DNA structure

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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CpGcluster: a distance-based algorithm for CpG-island detection

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PubMed

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Genomewide demarcation of RNA polymerase II transcription units revealed by physical fractionation of chromatin

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https://pubmed.ncbi.nlm.nih.gov/19921333

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12 December 2020

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inferred from PubMed ID database lookup

KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Cell type-specific methylation profiles occurring disproportionately in CpG-less regions that delineate developmental similarity

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Initial sequencing and analysis of the human genome

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https://pubmed.ncbi.nlm.nih.gov/19921333

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Identifiers

DOI

10.1007/S00335-009-9232-3

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Europe PubMed Central

PubMed publication ID

19921333

retrieved

14 May 2018

reference URL

http://europepmc.org/abstract/MED/19921333

PubMed publication ID

19921333

1 reference

stated in

Europe PubMed Central

PubMed publication ID

19921333

retrieved

14 May 2018

reference URL

http://europepmc.org/abstract/MED/19921333

 

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