Studying physical chromatin interactions in plants using Chromosome Conformation Capture (3C). (Q54471240)

30 May 2018

title

Studying physical chromatin interactions in plants using Chromosome Conformation Capture (3C). (English)

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30 May 2018

Wouter de Laat

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Marieke Louwers

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30 May 2018

Erik Splinter

series ordinal

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30 May 2018

Roel van Driel

series ordinal

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30 May 2018

Maike Stam

series ordinal

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30 May 2018

publication date

30 July 2009

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30 May 2018

published in

Nature Protocols

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30 May 2018

volume

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30 May 2018

issue

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30 May 2018

page(s)

1216-1229

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30 May 2018

Looping and interaction between hypersensitive sites in the active beta-globin locus

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Transient colocalization of X-inactivation centres accompanies the initiation of X inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Transient homologous chromosome pairing marks the onset of X inactivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Long-range chromatin regulatory interactions in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Capturing chromosome conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Tandem repetitive transgenes and fluorescent chromatin tags alter local interphase chromosome arrangement in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Quantitative analysis of chromosome conformation capture assays (3C-qPCR).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Tissue- and expression level-specific chromatin looping at maize b1 epialleles

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

CTCF mediates long-range chromatin looping and local histone modification in the beta-globin locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

An evaluation of 3C-based methods to capture DNA interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

SATB1 packages densely looped, transcriptionally active chromatin for coordinated expression of cytokine genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

ChIP-based methods for the identification of long-range chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

The three 'C' s of chromosome conformation capture: controls, controls, controls.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

Suggestive evidence for chromosomal localization of non-coding RNA from imprinted LIT1

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

3C technology: analyzing the spatial organization of genomic loci in vivo.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2009.113

31 March 2020

Identifiers

DOI

10.1038/NPROT.2009.113

1 reference

30 May 2018

1 reference

30 May 2018