Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence- and genome-wide studies for Arabidopsis and rice (Q43952398)

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English	Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence- and genome-wide studies for Arabidopsis and rice	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 November 2017

Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence- and genome-wide studies for Arabidopsis and rice (English)

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Europe PubMed Central

PubMed publication ID

28 November 2017

Georg H H Borner

object named as

Georg H H Borner

4

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Frank Eisenhaber

6

object named as

Frank Eisenhaber

1 reference

Europe PubMed Central

PubMed publication ID

28 November 2017

Birgit Eisenhaber

1

object named as

Birgit Eisenhaber

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Europe PubMed Central

PubMed publication ID

28 November 2017

Michael Wildpaner

2

object named as

Michael Wildpaner

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Europe PubMed Central

PubMed publication ID

28 November 2017

author name string

Carolyn J Schultz

3

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Europe PubMed Central

PubMed publication ID

28 November 2017

Paul Dupree

5

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Europe PubMed Central

PubMed publication ID

28 November 2017

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publication date

1 December 2003

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Europe PubMed Central

PubMed publication ID

28 November 2017

number of pages

11

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Plant Physiology

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Europe PubMed Central

PubMed publication ID

28 November 2017

133

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Europe PubMed Central

PubMed publication ID

28 November 2017

4

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Europe PubMed Central

PubMed publication ID

28 November 2017

1691-1701

1 reference

Europe PubMed Central

PubMed publication ID

28 November 2017

Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Enzymes and auxiliary factors for GPI lipid anchor biosynthesis and post-translational transfer to proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

The Arabidopsis SKU5 gene encodes an extracellular glycosyl phosphatidylinositol-anchored glycoprotein involved in directional root growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Cloning and characterization of cDNA of the GPI-anchored purple acid phosphatase and its root tissue distribution in Spirodela oligorrhiza

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

N-terminal N-myristoylation of proteins: prediction of substrate proteins from amino acid sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

N-terminal N-myristoylation of proteins: refinement of the sequence motif and its taxon-specific differences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

PIG-S and PIG-T, essential for GPI anchor attachment to proteins, form a complex with GAA1 and GPI8

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Addition of a glycophosphatidylinositol to acetylcholinesterase. Processing, degradation, and secretion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

COBRA encodes a putative GPI-anchored protein, which is polarly localized and necessary for oriented cell expansion in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Post-translational GPI lipid anchor modification of proteins in kingdoms of life: analysis of protein sequence data from complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Dissecting and manipulating the pathway for glycosylphos-phatidylinositol-anchor biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

The classical arabinogalactan protein gene family of arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Automated annotation of GPI anchor sites: case study C. elegans.

1 reference

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27 August 2018

The Pfam protein families database.

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27 August 2018

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

1 reference

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27 August 2018

Structure of the glycosylphosphatidylinositol anchor of an arabinogalactan protein from Pyrus communis suspension-cultured cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Prediction of potential GPI-modification sites in proprotein sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Glycosylphosphatidylinositol-anchored cell-surface proteins from Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

The structure, biosynthesis and functions of glycosylphosphatidylinositol anchors, and the contributions of trypanosome research.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

PSIC: profile extraction from sequence alignments with position-specific counts of independent observations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Machine learning approaches for the prediction of signal peptides and other protein sorting signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Arabinogalactan-proteins from Nicotiana alata and Pyrus communis contain glycosylphosphatidylinositol membrane anchors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Residues in Torpedo californica acetylcholinesterase necessary for processing to a glycosyl phosphatidylinositol-anchored form

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Left-handed polyproline II helices commonly occur in globular proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Requirements for glycosylphosphatidylinositol attachment are similar but not identical in mammalian cells and parasitic protozoa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Issues in searching molecular sequence databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Preferred Sites of Glycosylphosphatidylinositol Modification in Folate Receptors and Constraints in the Primary Structure of the Hydrophobic Portion of the Signal

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

How glycosylphosphatidylinositol-anchored membrane proteins are made

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

The MRC OX-45 antigen of rat leukocytes and endothelium is in a subset of the immunoglobulin superfamily with CD2, LFA-3 and carcinoembryonic antigens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Primary structure of human placental 5'-nucleotidase and identification of the glycolipid anchor in the mature form

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Identification of glycoinositol phospholipid linked and truncated forms of the scrapie prion protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Determinants for glycophospholipid anchoring of the Saccharomyces cerevisiae GAS1 protein to the plasma membrane

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Glycophospholipid membrane anchor attachment. Molecular analysis of the cleavage/attachment site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=300724

27 August 2018

Determination of carboxyl-terminal residue and disulfide bonds of MACIF (CD59), a glycosyl-phosphatidylinositol-anchored membrane protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence properties of GPI-anchored proteins near the omega-site: constraints for the polypeptide binding site of the putative transamidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

42 Prediction of ω site in nascent precursor of glycosylphosphatidylinositol protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The glycosylphosphatidylinositol-anchored phosphatase from Spirodela oligorrhiza is a purple acid phosphatase

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The procyclic acidic repetitive proteins of Trypanosoma brucei. Purification and post-translational modification

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for a glycosylinositolphospholipid-anchored alkaline phosphatase in the aquatic plant Spirodela oligorrhiza

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detection of glycosyl-phosphatidylinositol-anchored proteins on the surface of Nicotiana tabacum protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Glycosyl-phosphatidylinositol-anchor addition signals are processed in Nicotiana tabacum

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolutionary conservation of genomic sequences related to the GGP1 gene encoding a yeast GPI-anchored glycoprotein

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

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Acylation-dependent Protein Export in Leishmania

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681532

12 December 2020

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inferred from PubMed ID database lookup

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10.1104/PP.103.023580

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Europe PubMed Central

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28 November 2017

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