SwissTargetPrediction: a web server for target prediction of bioactive small molecules (Q42724602)

5 November 2017

SwissTargetPrediction: a web server for target prediction of bioactive small molecules (English)

1 reference

5 November 2017

1 reference

1 reference

5 November 2017

Aurélien Grosdidier

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Olivier Michielin

1 reference

5 November 2017

Matthias Wirth

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5 November 2017

Antoine Daina

series ordinal

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5 November 2017

Vincent Zoete

series ordinal

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5 November 2017

language of work or name

English

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publication date

3 May 2014

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5 November 2017

Nucleic Acids Research

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5 November 2017

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5 November 2017

Web Server issue

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5 November 2017

W32-8

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Creative Commons Attribution 3.0 Unported

5 November 2017

start time

10 November 2016

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April 2022 Public Data File from Crossref

copyrighted

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cites work

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The ChEMBL bioactivity database: an update

27 May 2018

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TreeFam v9: a new website, more species and orthology-on-the-fly

27 May 2018

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Shaping the interaction landscape of bioactive molecules.

27 May 2018

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Drug repurposing a reality: from computers to the clinic

27 May 2018

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Target identification for small bioactive molecules: finding the needle in the haystack

27 May 2018

1 reference

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Design, modification and 3D QSAR studies of novel naphthalin-containing pyrazoline derivatives with/without thiourea skeleton as anticancer agents

27 May 2018

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TargetHunter: an in silico target identification tool for predicting therapeutic potential of small organic molecules based on chemogenomic database

27 May 2018

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OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs

27 May 2018

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SwissBioisostere: a database of molecular replacements for ligand design.

27 May 2018

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Update on activities at the Universal Protein Resource (UniProt) in 2013

27 May 2018

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SwissSidechain: a molecular and structural database of non-natural sidechains

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Large-scale prediction and testing of drug activity on side-effect targets

27 May 2018

1 reference

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ZINC: a free tool to discover chemistry for biology

27 May 2018

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Drug Repurposing from an Academic Perspective

27 May 2018

1 reference

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Global analysis of small molecule binding to related protein targets

27 May 2018

1 reference

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Compound prioritization methods increase rates of chemical probe discovery in model organisms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

SwissDock, a protein-small molecule docking web service based on EADock DSS

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

SwissParam: A fast force field generation tool for small organic molecules

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

27 May 2018

1 reference

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GeneCards Version 3: the human gene integrator

27 May 2018

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A survey of yeast genomic assays for drug and target discovery

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Predicting new molecular targets for known drugs

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

HTS and hit finding in academia--from chemical genomics to drug discovery

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

The topology of drug-target interaction networks: implicit dependence on drug properties and target families

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Efficient drug lead discovery and optimization

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Protein function annotation by homology-based inference

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

The SWISS-MODEL Repository and associated resources

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Drug target identification using side-effect similarity

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

SuperPred: drug classification and target prediction

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

A quantitative analysis of kinase inhibitor selectivity

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

High-throughput screening assays for the identification of chemical probes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Chemogenomic approaches to drug discovery: similar receptors bind similar ligands

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Relating protein pharmacology by ligand chemistry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Can the pharmaceutical industry reduce attrition rates?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Complex phenotypic assays in high-throughput screening

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

ChemMapper: a versatile web server for exploring pharmacology and chemical structure association based on molecular 3D similarity method.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Detecting drug promiscuity using Gaussian ensemble screening

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Expanding molecular modeling and design tools to non-natural sidechains

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Rapid Shape-Based Ligand Alignment and Virtual Screening Method Based on Atom/Feature-Pair Similarities and Volume Overlap Scoring

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

SHAFTS: A Hybrid Approach for 3D Molecular Similarity Calculation. 1. Method and Assessment of Virtual Screening

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Protein-ligand interaction prediction: an improved chemogenomics approach.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Ultrafast shape recognition to search compound databases for similar molecular shapes

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086140

Improving the accuracy of ultrafast ligand-based screening: incorporating lipophilicity into ElectroShape as an extra dimension

16 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKU293

ElectroShape: fast molecular similarity calculations incorporating shape, chirality and electrostatics

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKU293

Inactivation of the uterine estrogen receptor binding of estradiol during P-450 catalyzed metabolism of chlorotrianisene (TACE). Speculation that TACE antiestrogenic activity involves covalent binding to the estrogen receptor

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24792161

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Bioactive Molecules: Perfectly Shaped for Their Target?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24792161

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKU293

1 reference

journals/nar/GfellerGWDMZ14

5 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

5 November 2017

PubMed publication ID

24792161

1 reference