New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes (Q40829863)

24 September 2017

New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes (English)

1 reference

24 September 2017

Hans Lehrach

1 reference

24 September 2017

Ralf Herwig

0 references

Martin Vingron

1 reference

24 September 2017

Georgia Panopoulou

1 reference

24 September 2017

Steffen Hennig

1 reference

24 September 2017

Detlef Groth

1 reference

24 September 2017

Antje Krause

1 reference

24 September 2017

Albert J Poustka

1 reference

24 September 2017

1 June 2003

1 reference

24 September 2017

1 reference

24 September 2017

1 reference

24 September 2017

1 reference

24 September 2017

1056-1066

1 reference

The human Hox-bearing chromosome regions did arise by block or chromosome (or even genome) duplications

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Recent segmental duplications in the human genome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Extensive genomic duplication during early chordate evolution

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Pattern and timing of gene duplication in animal genomes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Ancient genome duplications did not structure the human Hox-bearing chromosomes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Initial sequencing and analysis of the human genome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

The Sequence of the Human Genome

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

The InterPro database, an integrated documentation resource for protein families, domains and functional sites

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

The evolutionary fate and consequences of duplicate genes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gene ontology: tool for the unification of biology

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Comparative genomics of the eukaryotes

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gene duplication: past, present and future

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Large-scale clustering of cDNA-fingerprinting data

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Construction and analysis of arrayed cDNA libraries

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Divergence time estimates for the early history of animal phyla and the origin of plants, animals and fungi

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Comparison of the complete protein sets of worm and yeast: orthology and divergence

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

A molecular timescale for vertebrate evolution

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

A genomic perspective on protein families

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

PAML: a program package for phylogenetic analysis by maximum likelihood

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Prediction of complete gene structures in human genomic DNA

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Using CLUSTAL for multiple sequence alignments

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Details of the evolutionary history from invertebrates to vertebrates, as deduced from the sequences of 18S rDNA.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Archetypal organization of the amphioxus Hox gene cluster.

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Distinguishing Homologous from Analogous Proteins

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gen(om)e duplications in the evolution of early vertebrates

24 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Evolutionary patterns of gene families generated in the early stage of vertebrates

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Evidence in favour of ancient octaploidy in the vertebrate genome

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Eukaryote genome duplication - where's the evidence?

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gene duplications and the origins of vertebrate development

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403660

Gene expression profiles in Ciona intestinalis tailbud embryos

2 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12799346

12 December 2020

inferred from PubMed ID database lookup

Genomics. Gene duplication and evolution

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12799346

12 December 2020

inferred from PubMed ID database lookup

GeneNest: automated generation and visualization of gene indices

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12799346

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1101/GR.874803

1 reference

release_ytns7jq7jrbelmk774asd7awtu

24 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ytns7jq7jrbelmk774asd7awtu

24 November 2022

mapped directly with Wikidata item

1 reference

24 September 2017

PubMed publication ID

12799346

1 reference