Insufficient levels of the nrdAB-encoded ribonucleotide reductase underlie the severe growth defect of the Δhda E. coli strain. (Q48301794)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28130843%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

title

Insufficient levels of the nrdAB-encoded ribonucleotide reductase underlie the severe growth defect of the Δhda E. coli strain (English)

1 reference

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9 April 2020

0 references

1 reference

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9 April 2020

1 reference

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9 April 2020

1 reference

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9 April 2020

Vignesh M P Babu

1 reference

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9 April 2020

Mark Itsko

series ordinal

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9 April 2020

language of work or name

English

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publication date

13 March 2017

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9 April 2020

published in

Molecular Microbiology

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9 April 2020

volume

104

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9 April 2020

issue

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9 April 2020

page(s)

377-399

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Replication Initiation in Bacteria

9 April 2020

cites work

1 reference

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Oxidative DNA damage is instrumental in hyperreplication stress-induced inviability of Escherichia coli.

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dGTP starvation in Escherichia coli provides new insights into the thymineless-death phenomenon

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The β-sliding clamp directs the localization of HdaA to the replisome in Caulobacter crescentus

22 May 2018

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The tRNA thiolation pathway modulates the intracellular redox state in Escherichia coli

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DnaA binding locus datA promotes DnaA-ATP hydrolysis to enable cell cycle-coordinated replication initiation

22 May 2018

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7,8-Dihydro-8-oxoadenine, a highly mutagenic adduct, is repaired by Escherichia coli and human mismatch-specific uracil/thymine-DNA glycosylases

22 May 2018

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Evidence for roles of the Escherichia coli Hda protein beyond regulatory inactivation of DnaA.

22 May 2018

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Oxidation of the guanine nucleotide pool underlies cell death by bactericidal antibiotics

22 May 2018

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Novel mutator mutants of E. coli nrdAB ribonucleotide reductase: insight into allosteric regulation and control of mutation rates

22 May 2018

1 reference

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Mutations at several loci cause increased expression of ribonucleotide reductase in Escherichia coli

22 May 2018

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DNA stretching by bacterial initiators promotes replication origin opening

22 May 2018

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Regulation of DnaA assembly and activity: taking directions from the genome

22 May 2018

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Origin remodeling and opening in bacteria rely on distinct assembly states of the DnaA initiator

22 May 2018

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Role of RecA and the SOS response in thymineless death in Escherichia coli

22 May 2018

1 reference

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DnaA, ORC, and Cdc6: similarity beyond the domains of life and diversity.

22 May 2018

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Hydroxyurea induces hydroxyl radical-mediated cell death in Escherichia coli.

22 May 2018

1 reference

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Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter.

22 May 2018

1 reference

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DiaA dynamics are coupled with changes in initial origin complexes leading to helicase loading.

22 May 2018

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Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA.

22 May 2018

1 reference

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Modes of overinitiation, dnaA gene expression, and inhibition of cell division in a novel cold-sensitive hda mutant of Escherichia coli

22 May 2018

1 reference

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The interaction of DiaA and DnaA regulates the replication cycle in E. coli by directly promoting ATP DnaA-specific initiation complexes

22 May 2018

1 reference

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Amino acid residues of the Escherichia coli tRNA(m5U54)methyltransferase (TrmA) critical for stability, covalent binding of tRNA and enzymatic activity

22 May 2018

1 reference

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SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC.

22 May 2018

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Hda-mediated inactivation of the DnaA protein and dnaA gene autoregulation act in concert to ensure homeostatic maintenance of the Escherichia coli chromosome

22 May 2018

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DnaA: controlling the initiation of bacterial DNA replication and more

22 May 2018

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A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli.

22 May 2018

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Experimentally constrained topology models for 51,208 bacterial inner membrane proteins

22 May 2018

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Escherichia coli RecQ helicase: a player in thymineless death

22 May 2018

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Global topology analysis of the Escherichia coli inner membrane proteome

22 May 2018

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The Escherichia coli dnaN159 mutant displays altered DNA polymerase usage and chronic SOS induction

22 May 2018

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DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication.

22 May 2018

1 reference

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Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex.

22 May 2018

1 reference

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Interactions of glutaredoxins, ribonucleotide reductase, and components of the DNA replication system of Escherichia coli.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

Hyperinitiation of DNA replication in Escherichia coli leads to replication fork collapse and inviability

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

The induction of thymine synthesis by T2 infection of a thymine requiring mutant of Escherichia coli.

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

Roles of thiol-redox pathways in bacteria

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli

22 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

Expression analysis of the nrdHIEF operon from Escherichia coli. Conditions that trigger the transcript level in vivo

22 May 2018

1 reference

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Thymine metabolism and thymineless death in prokaryotes and eukaryotes

22 May 2018

1 reference

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Effects of purified SeqA protein on oriC-dependent DNA replication in vitro

22 May 2018

1 reference

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DnaA initiator--also a transcription factor

22 May 2018

1 reference

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Identification of the coding region for a second poly(A) polymerase in Escherichia coli

22 May 2018

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Membrane regulation of the chromosomal replication activity of E. coli DnaA requires a discrete site on the protein.

22 May 2018

1 reference

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Replicatively active complexes of DnaA protein and the Escherichia coli chromosomal origin observed in the electron microscope

22 May 2018

1 reference

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Escherichia coli Fis and DnaA proteins bind specifically to the nrd promoter region and affect expression of an nrd-lac fusion

22 May 2018

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Fluid membranes with acidic domains activate DnaA, the initiator protein of replication in Escherichia coli.

22 May 2018

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DnaA protein directs the binding of DnaB protein in initiation of DNA replication in Escherichia coli

22 May 2018

1 reference

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SeqA: a negative modulator of replication initiation in E. coli

22 May 2018

1 reference

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Regulation of the Escherichia coli heat-shock response.

22 May 2018

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E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration

22 May 2018

1 reference

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Effects of ethanol on the Escherichia coli plasma membrane

22 May 2018

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Nucleotide sequence of the Escherichia coli polA gene and primary structure of DNA polymerase I

22 May 2018

1 reference

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Mechanism of the Growth Inhibitory Effect of Cysteine on Escherichia coli

22 May 2018

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Hydrogen peroxide-inducible proteins in Salmonella typhimurium overlap with heat shock and other stress proteins

22 May 2018

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Characterization of the ftsB gene as an allele of the nrdB gene in Escherichia coli

22 May 2018

1 reference

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The recQ gene of Escherichia coli K12: molecular cloning and isolation of insertion mutants

22 May 2018

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Positive control of a regulon for defenses against oxidative stress and some heat-shock proteins in Salmonella typhimurium

22 May 2018

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Autoregulation of the DNA replication gene dnaA in E. coli K-12.

22 May 2018

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Differences in excretion and efficiency of the aerobactin and enterochelin siderophores in a bovine pathogenic strain of Escherichia coli

22 May 2018

1 reference

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dnaA protein regulates transcriptions of the rpoH gene of Escherichia coli.

22 May 2018

1 reference

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Two genes differentially regulated in the cell cycle and by DNA-damaging agents encode alternative regulatory subunits of ribonucleotide reductase

22 May 2018

1 reference

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DNA polymerase I and a protein complex bind specifically to E. coli palindromic unit highly repetitive DNA: implications for bacterial chromosome organization

22 May 2018

1 reference

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Regulation of transcription of the chromosomal dnaA gene of Escherichia coli.

22 May 2018

1 reference

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Initiation of DNA Replication

22 May 2018

1 reference

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Suppressors of DnaA(ATP) imposed overinitiation in Escherichia coli.

14 August 2018

1 reference

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DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli.

14 August 2018

1 reference

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Regulation of the replication cycle: conserved and diverse regulatory systems for DnaA and oriC.

14 August 2018

1 reference

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The role of replication initiation control in promoting survival of replication fork damage.

14 August 2018

1 reference

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Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex

14 August 2018

1 reference

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Stoichiometry of DnaA and DnaB protein in initiation at the Escherichia coli chromosomal origin

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli.

14 August 2018

1 reference

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Multiple cis-acting sites positively regulate Escherichia coli nrd expression

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

DnaA protein stimulates polA gene expression in Escherichia coli.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

Ordered and sequential binding of DnaA protein to oriC, the chromosomal origin of Escherichia coli.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5397354

A mutant of Escherichia coli defective in ribonucleosidediphosphate reductase. 1. Isolation of the mutant as a deoxyuridine auxotroph.

14 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1111%2FMMI.13632

A mutant of Escherichia coli defective in ribonucleosidediphosphate reductase. 2. Characterization of the enzymatic defect

21 January 2018

1 reference

12 December 2020

Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin

1 reference

12 December 2020

Regulation of ferric iron transport in Escherichia coli K12: isolation of a constitutive mutant

1 reference

12 December 2020

Transcriptional repression of the dnaA gene of Escherichia coli by dnaA protein

1 reference

12 December 2020

Residual polyadenylation in poly(A) polymerase I (pcnB ) mutants of Escherichia coli does not result from the activity encoded by the f310 gene

1 reference

12 December 2020

Identifiers

DOI

10.1111/MMI.13632

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28130843%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28130843%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

PubMed publication ID

28130843

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28130843%20AND%20SRC:MED&resulttype=core&format=json