SiTaR: a novel tool for transcription factor binding site prediction (Q48113433)

From Wikidata

Jump to navigation Jump to search

scientific article published on September 4, 2011

edit

Language	Label	Description	Also known as
English	SiTaR: a novel tool for transcription factor binding site prediction	scientific article published on September 4, 2011

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

title

SiTaR: a novel tool for transcription factor binding site prediction (English)

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

main subject

DNA sequencing

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21893518

retrieved

11 December 2024

software

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21893518

retrieved

11 December 2024

promoter

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21893518

retrieved

11 December 2024

author

Ekaterina Shelest

object named as

Ekaterina Shelest

series ordinal

3

0 references

author name string

Eugen Fazius

series ordinal

1

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

Vladimir Shelest

series ordinal

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

language of work or name

English

0 references

publication date

4 September 2011

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

full work available at URL

https://academic.oup.com/bioinformatics/article-pdf/27/20/2806/48872902/bioinformatics_27_20_2806.pdf

file format

Portable Document Format

online access status

open access

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21893518

retrieved

11 December 2024

published in

Bioinformatics

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

volume

27

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

issue

20

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

page(s)

2806-2811

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

cites work

Exploring conservation of transcription factor binding sites with CONREAL.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

Selection of DNA binding sites by regulatory proteins. Statistical-mechanical theory and application to operators and promoters.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

MatInspector and beyond: promoter analysis based on transcription factor binding sites

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

P-Match: transcription factor binding site search by combining patterns and weight matrices

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

Statistical significance of clusters of motifs represented by position specific scoring matrices in nucleotide sequences

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

DISCOVER: a feature-based discriminative method for motif search in complex genomes

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

An intuitionistic approach to scoring DNA sequences against transcription factor binding site motifs.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

MATCH: A tool for searching transcription factor binding sites in DNA sequences

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

TRANSFAC: transcriptional regulation, from patterns to profiles

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

Gibbs Recursive Sampler: finding transcription factor binding sites

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTR492

retrieved

21 January 2018

Identifiers

DOI

10.1093/BIOINFORMATICS/BTR492

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

DBLP publication ID

journals/bioinformatics/FaziusSS11

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PubMed publication ID

21893518

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21893518

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/21893518

ResearchGate publication ID

51621104

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q48113433&oldid=2286061874"