Automated backbone assignment of labeled proteins using the threshold accepting algorithm (Q48005168)

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scientific article published in January 1998

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Language	Label	Description	Also known as
English	Automated backbone assignment of labeled proteins using the threshold accepting algorithm	scientific article published in January 1998

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instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

title

Automated backbone assignment of labeled proteins using the threshold accepting algorithm (English)

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stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

main subject

automation

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author

Ruth M Gschwind

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2

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Europe PubMed Central

PubMed publication ID

9615996

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7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

Gerd Gemmecker

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5

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Europe PubMed Central

PubMed publication ID

9615996

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7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

author name string

M Leutner

series ordinal

1

1 reference

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Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

J Liermann

series ordinal

3

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stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

C Schwarz

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4

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Europe PubMed Central

PubMed publication ID

9615996

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7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

H Kessler

series ordinal

6

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stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

publication date

1 January 1998

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Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

published in

Journal of Biomolecular NMR

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stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

volume

11

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

issue

1

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

page(s)

31-43

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Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

cites work

A computer-based protocol for semiautomated assignments and 3D structure determination of proteins

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proton, carbon-13, and nitrogen-15 NMR backbone assignments and secondary structure of human interferon-.gamma

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

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Structure and properties of a human non-pancreatic phospholipase A2

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

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based on heuristic

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Use of fuzzy mathematics for complete automated assignment of peptide 1H 2D NMR spectra.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

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The multiple-minima problem in small peptides revisited. The Threshold Accepting approach.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

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1H, 13C, and 15N assignments and secondary structure of the FK506 binding protein when bound to ascomycin

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A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin

1 reference

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reference URL

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Automated analysis of nuclear magnetic resonance assignments for proteins

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

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An automated procedure for the assignment of protein 1HN, 15N, 13C alpha, 1H alpha, 13C beta and 1H beta resonances.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Side chain and backbone assignments in isotopically labeled proteins from two heteronuclear triple resonance experiments

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: a demonstration of the connectivity tracing assignment tools (CONTRAST) software package.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

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Studies on the NusB protein of Escherichia coli--expression and determination of secondary-structure elements by multinuclear NMR spectroscopy

1 reference

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Solution structure of the IIB domain of the glucose transporter of Escherichia coli

1 reference

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Secondary structure of the IIB domain of the Escherichia coli mannose transporter, a new fold in the class of alpha/beta twisted open-sheet structures

1 reference

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Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

1 reference

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Cloning and recombinant expression of phospholipase A2 present in rheumatoid arthritic synovial fluid

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NMR View: A computer program for the visualization and analysis of NMR data

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reference URL

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Proton, nitrogen-15, carbon-13, carbon-13 monoxide assignments of human interleukin-4 using three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopy

1 reference

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reference URL

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Automated probabilistic method for assigning backbone resonances of (13C,15N)-labeled proteins.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

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based on heuristic

inferred from PubMed ID database lookup

Optimization by Simulated Annealing

1 reference

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reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

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based on heuristic

inferred from PubMed ID database lookup

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

1 reference

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Automated sequence-specific NMR assignment of homologous proteins using the program GARANT.

1 reference

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reference URL

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retrieved

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AURELIA, a program for computer-aided analysis of multidimensional NMR spectra.

1 reference

stated in

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reference URL

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retrieved

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Use of deuterium labeling in NMR: overcoming a sizeable problem

1 reference

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reference URL

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retrieved

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inferred from PubMed ID database lookup

Computer assignment of the backbone resonances of labelled proteins using two-dimensional correlation experiments

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/9615996

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1023/A:1008298226961

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

Dimensions Publication ID

1006617940

0 references

PubMed publication ID

9615996

1 reference

stated in

Europe PubMed Central

PubMed publication ID

9615996

retrieved

7 February 2018

reference URL

http://europepmc.org/abstract/MED/9615996

 

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