The preparation of site-specifically modified riboswitch domains as an example for enzymatic ligation of chemically synthesized RNA fragments. (Q46388227)

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English	The preparation of site-specifically modified riboswitch domains as an example for enzymatic ligation of chemically synthesized RNA fragments.	scientific article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772873%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

The preparation of site-specifically modified riboswitch domains as an example for enzymatic ligation of chemically synthesized RNA fragments (English)

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13 January 2020

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13 January 2020

author name string

Ronald Micura

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13 January 2020

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1 January 2008

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13 January 2020

Nature Protocols

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13 January 2020

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13 January 2020

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13 January 2020

1457-1466

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13 January 2020

Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Genetic control by a metabolite binding mRNA

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Sensing Small Molecules by Nascent RNA

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

The distributions, mechanisms, and structures of metabolite-binding riboswitches

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Ribozymes, riboswitches and beyond: regulation of gene expression without proteins

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Riboswitches: small-molecule recognition by gene regulatory RNAs

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Riboswitch-dependent gene regulation and its evolution in the plant kingdom

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

From ribosome to riboswitch: control of gene expression in bacteria by RNA structural rearrangements

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Control of alternative RNA splicing and gene expression by eukaryotic riboswitches

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Structures of RNA switches: insight into molecular recognition and tertiary structure

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Gene regulation by riboswitches

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

The riboswitch control of bacterial metabolism

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Ligand-induced folding of the adenosine deaminase A-riboswitch and implications on riboswitch translational control.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Syntheses of RNAs with up to 100 nucleotides containing site-specific 2'-methylseleno labels for use in X-ray crystallography.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Folding of the adenine riboswitch

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Site-specific incorporation of nitroxide spin-labels into 2′-positions of nucleic acids

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Extending the NMR spatial resolution limit for RNA by motional couplings

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Characterizing the relative orientation and dynamics of RNA A-form helices using NMR residual dipolar couplings

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Synthesis and enzymatic incorporation of a fluorescent pyrimidine ribonucleotide

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Synthesis of oligo-RNAs with photocaged adenosine 2'-hydroxyls

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

2'-Methylseleno-modified oligoribonucleotides for X-ray crystallography synthesized by the ACE RNA solid-phase approach

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Selenium modification of nucleic acids: preparation of phosphoroselenoate derivatives for crystallographic phasing of nucleic acid structures.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

An RNA ligase-mediated method for the efficient creation of large, synthetic RNAs

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Optimizing splinted ligation of highly structured small RNAs.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Metabolite-binding RNA domains are present in the genes of eukaryotes

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5'-UTR

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Roles of Mg2+ in TPP-dependent riboswitch

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Tandem riboswitch architectures exhibit complex gene control functions.

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Ligand binding and gene control characteristics of tandem riboswitches in Bacillus anthracis

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Crystal structures of the thi-box riboswitch bound to thiamine pyrophosphate analogs reveal adaptive RNA-small molecule recognition

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Small interfering RNAs and their chemical synthesis

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Synthesis, Oxidation Behavior, Crystallization and Structure of 2‘-Methylseleno Guanosine Containing RNAs

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

21 January 2018

Preparation of large RNA oligonucleotides with complementary isotope-labeled segments for NMR structural studies

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

31 March 2020

Spin labeling of oligonucleotides with the nitroxide TPA and use of PELDOR, a pulse EPR method, to measure intramolecular distances

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

31 March 2020

Chemical synthesis of selenium-modified oligoribonucleotides and their enzymatic ligation leading to an U6 SnRNA stem-loop segment

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

31 March 2020

Selenium modification of nucleic acids: preparation of oligonucleotides with incorporated 2'-SeMe-uridine for crystallographic phasing of nucleic acid structures

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

31 March 2020

Triggering of RNA Secondary Structures by a Functionalized Nucleobase

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2008.135

31 March 2020

Identifiers

10.1038/NPROT.2008.135

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772873%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18772873%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

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