Generalized spring tensor models for protein fluctuation dynamics and conformation changes (Q33582637)

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English	Generalized spring tensor models for protein fluctuation dynamics and conformation changes	scientific article

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

title

Generalized spring tensor models for protein fluctuation dynamics and conformation changes. (English)

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

author

Tu-Liang Lin

object named as

Tu-Liang Lin

series ordinal

1

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author name string

Guang Song

series ordinal

2

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stated in

Europe PubMed Central

PubMed publication ID

20487510

retrieved

28 July 2017

publication date

17 May 2010

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

published in

BMC Structural Biology

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

volume

10 Suppl 1

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

page(s)

S3

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Europe PubMed Central

PubMed publication ID

20487510

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28 July 2017

cites work

A New Method for Coarse-Grained Elastic Normal-Mode Analysis

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PubMed Central

reference URL

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Bend-twist-stretch model for coarse elastic network simulation of biomolecular motion.

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21 June 2018

Protein elastic network models and the ranges of cooperativity

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PubMed Central

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21 June 2018

Allosteric transitions of supramolecular systems explored by network models: application to chaperonin GroEL.

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PubMed Central

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21 June 2018

Application of elastic network models to proteins in the crystalline state

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PubMed Central

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21 June 2018

Intrinsic dynamics of enzymes in the unbound state and relation to allosteric regulation

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21 June 2018

vGNM: a better model for understanding the dynamics of proteins in crystals

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21 June 2018

Folding-based molecular simulations reveal mechanisms of the rotary motor F1-ATPase

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PubMed Central

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21 June 2018

Reorientational contact-weighted elastic network model for the prediction of protein dynamics: comparison with NMR relaxation

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PubMed Central

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21 June 2018

Coarse-grained normal mode analysis in structural biology

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PubMed Central

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21 June 2018

Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes

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21 June 2018

Dynamics of proteins in crystals: comparison of experiment with simple models

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PubMed Central

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21 June 2018

Conformational change of proteins arising from normal mode calculations

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PubMed Central

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21 June 2018

Anisotropy of fluctuation dynamics of proteins with an elastic network model

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21 June 2018

The Protein Data Bank

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PubMed Central

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21 June 2018

Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential

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21 June 2018

A unification of the elastic network model and the Gaussian network model for optimal description of protein conformational motions and fluctuations

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31 October 2018

Automatic domain decomposition of proteins by a Gaussian Network Model

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Roles of native topology and chain-length scaling in protein folding: a simulation study with a Go-like model.

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31 October 2018

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

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31 October 2018

Analysis of domain motions by approximate normal mode calculations

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PubMed Central

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31 October 2018

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873826

retrieved

31 October 2018

Comment on elastic network models and proteins

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/20487510

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12 December 2020

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Identification of dynamical correlations within the myosin motor domain by the normal mode analysis of an elastic network model

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/20487510

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12 December 2020

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An enhanced elastic network model to represent the motions of domain-swapped proteins

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/20487510

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12 December 2020

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Identifiers

DOI

10.1186/1472-6807-10-S1-S3

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stated in

Europe PubMed Central

PubMed publication ID

20487510

retrieved

28 July 2017

Dimensions Publication ID

1048925612

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PMC publication ID

2873826

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stated in

Europe PubMed Central

PubMed publication ID

20487510

retrieved

28 July 2017

PubMed publication ID

20487510

1 reference

stated in

Europe PubMed Central

PubMed publication ID

20487510

retrieved

28 July 2017

ResearchGate publication ID

44616133

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