Ultraconserved coding regions outside the homeobox of mammalian Hox genes (Q33371806)

26 July 2017

title

Ultraconserved coding regions outside the homeobox of mammalian Hox genes (English)

1 reference

26 July 2017

Masatoshi Nei

1 reference

26 July 2017

Zhenguo Lin

1 reference

26 July 2017

Hong Ma

series ordinal

1 reference

26 July 2017

language of work or name

1 reference

24 September 2008

1 reference

26 July 2017

published in

BMC Evolutionary Biology

1 reference

26 July 2017

1 reference

26 July 2017

page(s)

260

1 reference

Genomic evolution of the placenta using co-option and duplication and divergence

26 July 2017

cites work

1 reference

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Human genome ultraconserved elements are ultraselected

21 June 2018

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21 June 2018

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21 June 2018

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Extensive polycistronism and antisense transcription in the mammalian Hox clusters

21 June 2018

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In vivo enhancer analysis of human conserved non-coding sequences

21 June 2018

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21 June 2018

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An internal antisense RNA regulates expression of the photosynthesis gene isiA

21 June 2018

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Regions of extreme synonymous codon selection in mammalian genes

21 June 2018

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Hearing silence: non-neutral evolution at synonymous sites in mammals

21 June 2018

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Synonymous SNPs provide evidence for selective constraint on human exonic splicing enhancers

21 June 2018

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Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals

21 June 2018

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Highly conserved non-coding sequences are associated with vertebrate development

21 June 2018

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Ultraconserved Elements in the Human Genome

21 June 2018

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Translational selection and yeast proteome evolution

21 June 2018

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Evolutionary conservation of regulatory elements in vertebrate Hox gene clusters

21 June 2018

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Initial sequencing and comparative analysis of the mouse genome

21 June 2018

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Predictive identification of exonic splicing enhancers in human genes

21 June 2018

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Listening to silence and understanding nonsense: exonic mutations that affect splicing

21 June 2018

1 reference

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Synonymous codon usage in bacteria

21 June 2018

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Initial sequencing and analysis of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Estimation of divergence times from multiprotein sequences for a few mammalian species and several distantly related organisms

21 June 2018

1 reference

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Evolutionary conservation and tissue-specific processing of Hoxa 11 antisense transcripts

21 June 2018

1 reference

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A molecular timescale for vertebrate evolution

21 June 2018

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Positive Darwinian selection after gene duplication in primate ribonuclease genes

21 June 2018

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 June 2018

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Tetraodon fluviatilis, a new puffer fish model for genome studies

21 June 2018

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Regulation of beta-globin gene expression: straightening out the locus.

21 June 2018

1 reference

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Evolution of Antennapedia-class homeobox genes

21 June 2018

1 reference

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Homeodomain-DNA recognition

21 June 2018

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Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy.

21 June 2018

1 reference

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Hox genes in vertebrate development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Hoxa 11 structure, extensive antisense transcription, and function in male and female fertility

21 June 2018

1 reference

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21 June 2018

Non-Darwinian Evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

"Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons

21 June 2018

1 reference

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Differential expression of the mouse homeobox-containing gene Hox-1.4 during male germ cell differentiation and embryonic development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Biased codon usage near intron-exon junctions: selection on splicing enhancers, splice-site recognition or something else?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Expression of HOX gene products in normal and abnormal trophoblastic tissue.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Hox genes as synchronized temporal regulators: implications for morphological innovation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Hox protein mutation and macroevolution of the insect body plan

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Evolution of a transcriptional repression domain in an insect Hox protein

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Abdominal-B protein isoforms exhibit distinct cuticular transformations and regulatory activities when ectopically expressed in Drosophila embryos.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

Molecular phylogeny and divergence times of drosophilid species

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2566984

A highly unexpected strong correlation between fixation probability of nonsynonymous mutations and mutation rate

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18816392

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence for Purifying Selection Against Synonymous Mutations in Mammalian Exonic Splicing Enhancers

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18816392

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-8-260

1 reference

Dimensions Publication ID

26 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-8-260

9 September 2019

1 reference

26 July 2017

1 reference