Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions (Q33347428)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Exploiting gene deletion fitness effects in yeast to understand the modular architecture of protein complexes under different growth conditions (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

object named as

Patrick Aloy

3

0 references

Mohan Madan Babu

2

object named as

M Madan Babu

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

author name string

Roland A Pache

1

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

publication date

18 July 2009

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

BMC Systems Biology

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

3

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

74

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

A complex-based reconstruction of the Saccharomyces cerevisiae interactome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

High-quality binary protein interaction map of the yeast interactome network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Why do hubs in the yeast protein interaction network tend to be essential: reexamining the connection between the network topology and essentiality

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

The chemical genomic portrait of yeast: uncovering a phenotype for all genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Histone crosstalk between H2B monoubiquitination and H3 methylation mediated by COMPASS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

The complex language of chromatin regulation during transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

H2B ubiquitylation in transcriptional control: a FACT-finding mission

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Assessing systems properties of yeast mitochondria through an interaction map of the organelle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Why do hubs tend to be essential in protein networks?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

A global view of pleiotropy and phenotypically derived gene function in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

The origins and evolution of functional modules: lessons from protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Proteome survey reveals modularity of the yeast cell machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

MPact: the MIPS protein interaction resource on yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

The deubiquitylation activity of Ubp8 is dependent upon Sgf11 and its association with the SAGA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Genomic analysis of essentiality within protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Global mapping of the yeast genetic interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Global analysis of protein expression in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Bioinformatics analysis of experimentally determined protein complexes in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Role of duplicate genes in genetic robustness against null mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Active genes are tri-methylated at K4 of histone H3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Functional profiling of the Saccharomyces cerevisiae genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Systematic screen for human disease genes in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Evolutionary rate in the protein interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

COMPASS, a histone H3 (Lysine 4) methyltransferase required for telomeric silencing of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Systematic genetic analysis with ordered arrays of yeast deletion mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Lethality and centrality in protein networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

21 June 2018

Molecular regulation of histone H3 trimethylation by COMPASS and the regulation of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

31 October 2018

Gene essentiality and the topology of protein interaction networks.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

31 October 2018

Metabolic network analysis of the causes and evolution of enzyme dispensability in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

31 October 2018

Proteasomal ATPases link ubiquitylation of histone H2B to methylation of histone H3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

31 October 2018

The constraints protein-protein interactions place on sequence divergence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717920

31 October 2018

Are protein complexes made of cores, modules and attachments?

1 reference

https://pubmed.ncbi.nlm.nih.gov/19615085

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic pleiotropy in Saccharomyces cerevisiae quantified by high-resolution phenotypic profiling

1 reference

https://pubmed.ncbi.nlm.nih.gov/19615085

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1752-0509-3-74

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

DBLP publication ID

journals/bmcsb/PacheBA09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33347428&oldid=2195268369"