iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences (Q33282962)

25 July 2017

title

iHMMune-align: hidden Markov model-based alignment and identification of germline genes in rearranged immunoglobulin gene sequences (English)

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25 July 2017

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Bruno A Gaëta

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25 July 2017

Harald R Malming

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25 July 2017

Katherine J L Jackson

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25 July 2017

Michael E Bain

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25 July 2017

Patrick Wilson

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25 July 2017

Andrew M Collins

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25 July 2017

language of work or name

English

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publication date

26 April 2007

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25 July 2017

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25 July 2017

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25 July 2017

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25 July 2017

page(s)

1580-1587

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Terminal deoxynucleotidyl transferase and repertoire development

25 July 2017

cites work

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

Partitioning of rearranged Ig genes by mutation analysis demonstrates D-D fusion and V gene replacement in the expressed human repertoire

21 January 2018

1 reference

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Sequence of the human immunoglobulin diversity (D) segment locus: a systematic analysis provides no evidence for the use of DIR segments, inverted D segments, “minor” D segments or D-D recombination 1 1Edited By J. Karn

21 January 2018

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Immunoglobulin variable-region gene usage in systemic autoimmune diseases

21 January 2018

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IMGT/V-QUEST, an integrated software program for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis

21 January 2018

1 reference

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Optimal sequence alignment allowing for long gaps.

21 January 2018

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VH usage and somatic hypermutation in peripheral blood B cells of patients with rheumatoid arthritis (RA).

21 January 2018

1 reference

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Exonuclease activity and P nucleotide addition in the generation of the expressed immunoglobulin repertoire

21 January 2018

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Contextual interactions determine whether the Drosophila homeodomain protein, Vnd, acts as a repressor or activator

21 January 2018

1 reference

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Molecular analysis of immunoglobulin genes in multiple myeloma

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

Reconsidering the human immunoglobulin heavy-chain locus: 1. An evaluation of the expressed human IGHD gene repertoire

21 January 2018

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Nomenclature of the human immunoglobulin heavy (IGH) genes

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

IMGT, the international ImMunoGeneTics information system: a standardized approach for immunogenetics and immunoinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

IMGT, the international ImMunoGeneTics information system

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

Genetic diversity of the human immunoglobulin heavy chain VH region

21 January 2018

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Somatic hypermutation at A.T pairs: polymerase error versus dUTP incorporation.

21 January 2018

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A tutorial on hidden Markov models and selected applications in speech recognition

21 January 2018

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The intrinsic hypermutability of antibody heavy and light chain genes decays exponentially

21 January 2018

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Structure of the human immunoglobulin μ locus: Characterization of embryonic and rearranged J and D genes

21 January 2018

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The human immunoglobulin heavy diversity (IGHD) and joining (IGHJ) segments.

21 January 2018

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Identification of common molecular subsequences

21 January 2018

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Characterization of the human Ig heavy chain antigen binding complementarity determining region 3 using a newly developed software algorithm, JOINSOLVER.

21 January 2018

1 reference

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Somatically mutated Ig V(H)3-21 genes characterize a new subset of chronic lymphocytic leukemia

21 January 2018

1 reference

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SoDA: implementation of a 3D alignment algorithm for inference of antigen receptor recombinations

21 January 2018

1 reference

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Chronic lymphocytic leukemia B cells of more than 1% of patients express virtually identical immunoglobulins

21 January 2018

1 reference

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Somatic Hypermutation Introduces Insertions and Deletions into Immunoglobulin V Genes

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

Intricate targeting of immunoglobulin somatic hypermutation maximizes the efficiency of affinity maturation

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM147

10.1093/BIOINFORMATICS/BTM147

21 January 2018

Identifiers

DOI

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journals/bioinformatics/GaetaMJBWC07

25 July 2017

DBLP publication ID

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DBLP Dataset 2021-01-02

release_cvad25airjbefpbc5qc6bpwlre

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/cvad25airjbefpbc5qc6bpwlre

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference